Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.76■□□□□ 0.59
CUEDC1Q9NWM3 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.76■□□□□ 0.59
CUEDC1Q9NWM3 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CUEDC1Q9NWM3 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CUEDC1Q9NWM3 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CUEDC1Q9NWM3 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CUEDC1Q9NWM3 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.75■□□□□ 0.59
CUEDC1Q9NWM3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CUEDC1Q9NWM3 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.75■□□□□ 0.59
CUEDC1Q9NWM3 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CUEDC1Q9NWM3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CUEDC1Q9NWM3 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CUEDC1Q9NWM3 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.75■□□□□ 0.59
CUEDC1Q9NWM3 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CUEDC1Q9NWM3 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CUEDC1Q9NWM3 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CUEDC1Q9NWM3 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.75■□□□□ 0.59
CUEDC1Q9NWM3 C1QL1P1-201ENST00000568105 661 ntBASIC18.75■□□□□ 0.59
CUEDC1Q9NWM3 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CUEDC1Q9NWM3 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CUEDC1Q9NWM3 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CUEDC1Q9NWM3 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CUEDC1Q9NWM3 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CUEDC1Q9NWM3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CUEDC1Q9NWM3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CUEDC1Q9NWM3 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CUEDC1Q9NWM3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CUEDC1Q9NWM3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.74■□□□□ 0.59
CUEDC1Q9NWM3 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.74■□□□□ 0.59
CUEDC1Q9NWM3 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CUEDC1Q9NWM3 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CUEDC1Q9NWM3 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CUEDC1Q9NWM3 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CUEDC1Q9NWM3 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CUEDC1Q9NWM3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
CUEDC1Q9NWM3 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CUEDC1Q9NWM3 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.74■□□□□ 0.59
CUEDC1Q9NWM3 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CUEDC1Q9NWM3 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CUEDC1Q9NWM3 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CUEDC1Q9NWM3 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CUEDC1Q9NWM3 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CUEDC1Q9NWM3 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
CUEDC1Q9NWM3 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.74■□□□□ 0.59
CUEDC1Q9NWM3 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.74■□□□□ 0.59
CUEDC1Q9NWM3 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.74■□□□□ 0.59
CUEDC1Q9NWM3 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.74■□□□□ 0.59
CUEDC1Q9NWM3 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.74■□□□□ 0.59
CUEDC1Q9NWM3 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CUEDC1Q9NWM3 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CUEDC1Q9NWM3 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CUEDC1Q9NWM3 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
CUEDC1Q9NWM3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.74■□□□□ 0.59
CUEDC1Q9NWM3 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CUEDC1Q9NWM3 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CUEDC1Q9NWM3 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CUEDC1Q9NWM3 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CUEDC1Q9NWM3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CUEDC1Q9NWM3 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CUEDC1Q9NWM3 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CUEDC1Q9NWM3 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CUEDC1Q9NWM3 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CUEDC1Q9NWM3 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CUEDC1Q9NWM3 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CUEDC1Q9NWM3 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CUEDC1Q9NWM3 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CUEDC1Q9NWM3 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CUEDC1Q9NWM3 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CUEDC1Q9NWM3 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.73■□□□□ 0.59
CUEDC1Q9NWM3 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CUEDC1Q9NWM3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CUEDC1Q9NWM3 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CUEDC1Q9NWM3 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CUEDC1Q9NWM3 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CUEDC1Q9NWM3 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CUEDC1Q9NWM3 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.73■□□□□ 0.59
CUEDC1Q9NWM3 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.73■□□□□ 0.59
CUEDC1Q9NWM3 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CUEDC1Q9NWM3 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.73■□□□□ 0.59
CUEDC1Q9NWM3 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.73■□□□□ 0.59
CUEDC1Q9NWM3 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.73■□□□□ 0.59
CUEDC1Q9NWM3 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.73■□□□□ 0.59
CUEDC1Q9NWM3 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CUEDC1Q9NWM3 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.73■□□□□ 0.59
CUEDC1Q9NWM3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CUEDC1Q9NWM3 HTR7P1-201ENST00000538670 1336 ntBASIC18.73■□□□□ 0.59
CUEDC1Q9NWM3 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CUEDC1Q9NWM3 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CUEDC1Q9NWM3 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.72■□□□□ 0.59
CUEDC1Q9NWM3 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CUEDC1Q9NWM3 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CUEDC1Q9NWM3 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CUEDC1Q9NWM3 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.72■□□□□ 0.59
CUEDC1Q9NWM3 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.72■□□□□ 0.59
CUEDC1Q9NWM3 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CUEDC1Q9NWM3 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CUEDC1Q9NWM3 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CUEDC1Q9NWM3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CUEDC1Q9NWM3 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CUEDC1Q9NWM3 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms