Protein–RNA interactions for Protein: Q9HCH3

CPNE5, Copine-5, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE5Q9HCH3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE5Q9HCH3 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE5Q9HCH3 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.71■□□□□ 0.59
CPNE5Q9HCH3 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
CPNE5Q9HCH3 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CPNE5Q9HCH3 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE5Q9HCH3 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE5Q9HCH3 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE5Q9HCH3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE5Q9HCH3 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE5Q9HCH3 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE5Q9HCH3 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE5Q9HCH3 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE5Q9HCH3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE5Q9HCH3 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE5Q9HCH3 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.7■□□□□ 0.58
CPNE5Q9HCH3 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE5Q9HCH3 ECEL1P2-202ENST00000465689 757 ntBASIC18.7■□□□□ 0.58
CPNE5Q9HCH3 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.7■□□□□ 0.58
CPNE5Q9HCH3 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CPNE5Q9HCH3 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE5Q9HCH3 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.7■□□□□ 0.58
CPNE5Q9HCH3 AC091076.1-201ENST00000610741 619 ntBASIC18.7■□□□□ 0.58
CPNE5Q9HCH3 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CPNE5Q9HCH3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CPNE5Q9HCH3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE5Q9HCH3 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CPNE5Q9HCH3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.7■□□□□ 0.58
CPNE5Q9HCH3 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE5Q9HCH3 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE5Q9HCH3 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.7■□□□□ 0.58
CPNE5Q9HCH3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE5Q9HCH3 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE5Q9HCH3 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
CPNE5Q9HCH3 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CPNE5Q9HCH3 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE5Q9HCH3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.69■□□□□ 0.58
CPNE5Q9HCH3 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.69■□□□□ 0.58
CPNE5Q9HCH3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CPNE5Q9HCH3 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE5Q9HCH3 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE5Q9HCH3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE5Q9HCH3 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CPNE5Q9HCH3 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE5Q9HCH3 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CPNE5Q9HCH3 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.69■□□□□ 0.58
CPNE5Q9HCH3 NIFKP9-201ENST00000419265 221 ntBASIC18.69■□□□□ 0.58
CPNE5Q9HCH3 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.69■□□□□ 0.58
CPNE5Q9HCH3 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE5Q9HCH3 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.69■□□□□ 0.58
CPNE5Q9HCH3 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.69■□□□□ 0.58
CPNE5Q9HCH3 AC023632.3-201ENST00000521633 145 ntBASIC18.69■□□□□ 0.58
CPNE5Q9HCH3 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.69■□□□□ 0.58
CPNE5Q9HCH3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CPNE5Q9HCH3 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE5Q9HCH3 PLK5-205ENST00000642079 1969 ntBASIC18.69■□□□□ 0.58
CPNE5Q9HCH3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE5Q9HCH3 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.69■□□□□ 0.58
CPNE5Q9HCH3 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.69■□□□□ 0.58
CPNE5Q9HCH3 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE5Q9HCH3 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE5Q9HCH3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CPNE5Q9HCH3 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE5Q9HCH3 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE5Q9HCH3 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE5Q9HCH3 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE5Q9HCH3 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE5Q9HCH3 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE5Q9HCH3 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE5Q9HCH3 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.68■□□□□ 0.58
CPNE5Q9HCH3 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.68■□□□□ 0.58
CPNE5Q9HCH3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE5Q9HCH3 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE5Q9HCH3 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE5Q9HCH3 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE5Q9HCH3 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE5Q9HCH3 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE5Q9HCH3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CPNE5Q9HCH3 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE5Q9HCH3 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE5Q9HCH3 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE5Q9HCH3 AK4P3-201ENST00000418260 669 ntBASIC18.68■□□□□ 0.58
CPNE5Q9HCH3 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CPNE5Q9HCH3 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.68■□□□□ 0.58
CPNE5Q9HCH3 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE5Q9HCH3 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE5Q9HCH3 KRT18P56-201ENST00000507275 550 ntBASIC18.68■□□□□ 0.58
CPNE5Q9HCH3 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE5Q9HCH3 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.68■□□□□ 0.58
CPNE5Q9HCH3 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CPNE5Q9HCH3 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.68■□□□□ 0.58
CPNE5Q9HCH3 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.68■□□□□ 0.58
CPNE5Q9HCH3 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.68■□□□□ 0.58
CPNE5Q9HCH3 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE5Q9HCH3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE5Q9HCH3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE5Q9HCH3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE5Q9HCH3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE5Q9HCH3 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.68■□□□□ 0.58
CPNE5Q9HCH3 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms