Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.02■□□□□ 0.8
PCDH9Q9HC56 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
PCDH9Q9HC56 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH9Q9HC56 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH9Q9HC56 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH9Q9HC56 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH9Q9HC56 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
PCDH9Q9HC56 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH9Q9HC56 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCDH9Q9HC56 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCDH9Q9HC56 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
PCDH9Q9HC56 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDH9Q9HC56 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH9Q9HC56 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH9Q9HC56 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDH9Q9HC56 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDH9Q9HC56 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH9Q9HC56 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH9Q9HC56 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH9Q9HC56 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.01■□□□□ 0.79
PCDH9Q9HC56 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH9Q9HC56 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.01■□□□□ 0.79
PCDH9Q9HC56 ESRRAP1-201ENST00000400596 1257 ntBASIC20.01■□□□□ 0.79
PCDH9Q9HC56 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH9Q9HC56 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH9Q9HC56 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.01■□□□□ 0.79
PCDH9Q9HC56 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH9Q9HC56 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH9Q9HC56 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH9Q9HC56 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH9Q9HC56 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH9Q9HC56 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH9Q9HC56 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH9Q9HC56 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH9Q9HC56 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH9Q9HC56 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH9Q9HC56 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH9Q9HC56 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH9Q9HC56 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
PCDH9Q9HC56 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH9Q9HC56 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDH9Q9HC56 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
PCDH9Q9HC56 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20■□□□□ 0.79
PCDH9Q9HC56 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDH9Q9HC56 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20■□□□□ 0.79
PCDH9Q9HC56 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDH9Q9HC56 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDH9Q9HC56 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDH9Q9HC56 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDH9Q9HC56 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
PCDH9Q9HC56 POM121L13P-201ENST00000422362 380 ntBASIC20■□□□□ 0.79
PCDH9Q9HC56 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20■□□□□ 0.79
PCDH9Q9HC56 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20■□□□□ 0.79
PCDH9Q9HC56 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20■□□□□ 0.79
PCDH9Q9HC56 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20■□□□□ 0.79
PCDH9Q9HC56 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
PCDH9Q9HC56 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20■□□□□ 0.79
PCDH9Q9HC56 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20■□□□□ 0.79
PCDH9Q9HC56 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
PCDH9Q9HC56 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
PCDH9Q9HC56 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDH9Q9HC56 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20■□□□□ 0.79
PCDH9Q9HC56 AC141586.3-201ENST00000562166 1838 ntBASIC19.99■□□□□ 0.79
PCDH9Q9HC56 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH9Q9HC56 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH9Q9HC56 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
PCDH9Q9HC56 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.99■□□□□ 0.79
PCDH9Q9HC56 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH9Q9HC56 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.99■□□□□ 0.79
PCDH9Q9HC56 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.99■□□□□ 0.79
PCDH9Q9HC56 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH9Q9HC56 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH9Q9HC56 TEX21P-204ENST00000641479 1693 ntBASIC19.99■□□□□ 0.79
PCDH9Q9HC56 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH9Q9HC56 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.99■□□□□ 0.79
PCDH9Q9HC56 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH9Q9HC56 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.99■□□□□ 0.79
PCDH9Q9HC56 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH9Q9HC56 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH9Q9HC56 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.99■□□□□ 0.79
PCDH9Q9HC56 ZNF815P-204ENST00000434898 1737 ntBASIC19.99■□□□□ 0.79
PCDH9Q9HC56 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH9Q9HC56 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH9Q9HC56 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH9Q9HC56 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH9Q9HC56 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDH9Q9HC56 AL161938.1-201ENST00000569833 2180 ntBASIC19.98■□□□□ 0.79
PCDH9Q9HC56 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
PCDH9Q9HC56 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
PCDH9Q9HC56 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH9Q9HC56 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
PCDH9Q9HC56 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH9Q9HC56 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDH9Q9HC56 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDH9Q9HC56 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH9Q9HC56 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH9Q9HC56 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDH9Q9HC56 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH9Q9HC56 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.98■□□□□ 0.79
PCDH9Q9HC56 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms