Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AL390961.4-201ENST00000623958 2535 ntBASIC12.99□□□□□ -0.33
SND1-IT1Q9HBX3 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
SND1-IT1Q9HBX3 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC12.99□□□□□ -0.33
SND1-IT1Q9HBX3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SND1-IT1Q9HBX3 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SND1-IT1Q9HBX3 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SND1-IT1Q9HBX3 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SND1-IT1Q9HBX3 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SND1-IT1Q9HBX3 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SND1-IT1Q9HBX3 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC12.98□□□□□ -0.33
SND1-IT1Q9HBX3 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
SND1-IT1Q9HBX3 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC12.98□□□□□ -0.33
SND1-IT1Q9HBX3 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SND1-IT1Q9HBX3 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SND1-IT1Q9HBX3 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SND1-IT1Q9HBX3 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC12.98□□□□□ -0.33
SND1-IT1Q9HBX3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SND1-IT1Q9HBX3 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SND1-IT1Q9HBX3 AC027612.3-201ENST00000413684 1047 ntBASIC12.98□□□□□ -0.33
SND1-IT1Q9HBX3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC12.98□□□□□ -0.33
SND1-IT1Q9HBX3 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC12.98□□□□□ -0.33
SND1-IT1Q9HBX3 TESC-206ENST00000541210 936 ntTSL 3 BASIC12.98□□□□□ -0.33
SND1-IT1Q9HBX3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC12.98□□□□□ -0.33
SND1-IT1Q9HBX3 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC12.98□□□□□ -0.33
SND1-IT1Q9HBX3 SLC7A5P1-201ENST00000568957 537 ntBASIC12.98□□□□□ -0.33
SND1-IT1Q9HBX3 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
SND1-IT1Q9HBX3 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SND1-IT1Q9HBX3 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SND1-IT1Q9HBX3 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
SND1-IT1Q9HBX3 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SND1-IT1Q9HBX3 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
SND1-IT1Q9HBX3 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SND1-IT1Q9HBX3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC12.98□□□□□ -0.33
SND1-IT1Q9HBX3 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
SND1-IT1Q9HBX3 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SND1-IT1Q9HBX3 AC104581.1-202ENST00000635932 2618 ntBASIC12.98□□□□□ -0.33
SND1-IT1Q9HBX3 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SND1-IT1Q9HBX3 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC12.98□□□□□ -0.33
SND1-IT1Q9HBX3 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SND1-IT1Q9HBX3 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SND1-IT1Q9HBX3 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
SND1-IT1Q9HBX3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SND1-IT1Q9HBX3 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC12.98□□□□□ -0.33
SND1-IT1Q9HBX3 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
SND1-IT1Q9HBX3 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SND1-IT1Q9HBX3 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SND1-IT1Q9HBX3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC12.97□□□□□ -0.33
SND1-IT1Q9HBX3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC12.97□□□□□ -0.33
SND1-IT1Q9HBX3 COMP-202ENST00000425807 2292 ntTSL 2 BASIC12.97□□□□□ -0.33
SND1-IT1Q9HBX3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SND1-IT1Q9HBX3 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC12.97□□□□□ -0.33
SND1-IT1Q9HBX3 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC12.97□□□□□ -0.33
SND1-IT1Q9HBX3 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SND1-IT1Q9HBX3 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SND1-IT1Q9HBX3 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SND1-IT1Q9HBX3 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC12.97□□□□□ -0.33
SND1-IT1Q9HBX3 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SND1-IT1Q9HBX3 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC12.97□□□□□ -0.33
SND1-IT1Q9HBX3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC12.97□□□□□ -0.33
SND1-IT1Q9HBX3 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
SND1-IT1Q9HBX3 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC12.97□□□□□ -0.33
SND1-IT1Q9HBX3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SND1-IT1Q9HBX3 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SND1-IT1Q9HBX3 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC12.97□□□□□ -0.33
SND1-IT1Q9HBX3 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC12.97□□□□□ -0.33
SND1-IT1Q9HBX3 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
SND1-IT1Q9HBX3 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC12.97□□□□□ -0.33
SND1-IT1Q9HBX3 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SND1-IT1Q9HBX3 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
SND1-IT1Q9HBX3 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SND1-IT1Q9HBX3 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SND1-IT1Q9HBX3 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
SND1-IT1Q9HBX3 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC12.97□□□□□ -0.33
SND1-IT1Q9HBX3 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC12.97□□□□□ -0.33
SND1-IT1Q9HBX3 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SND1-IT1Q9HBX3 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SND1-IT1Q9HBX3 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SND1-IT1Q9HBX3 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SND1-IT1Q9HBX3 AC087633.2-202ENST00000565166 1439 ntBASIC12.96□□□□□ -0.33
SND1-IT1Q9HBX3 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
SND1-IT1Q9HBX3 FZD10-202ENST00000539839 3282 ntBASIC12.96□□□□□ -0.33
SND1-IT1Q9HBX3 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SND1-IT1Q9HBX3 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SND1-IT1Q9HBX3 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC12.96□□□□□ -0.33
SND1-IT1Q9HBX3 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SND1-IT1Q9HBX3 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
SND1-IT1Q9HBX3 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SND1-IT1Q9HBX3 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SND1-IT1Q9HBX3 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC12.96□□□□□ -0.33
SND1-IT1Q9HBX3 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SND1-IT1Q9HBX3 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
SND1-IT1Q9HBX3 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
SND1-IT1Q9HBX3 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SND1-IT1Q9HBX3 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SND1-IT1Q9HBX3 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
SND1-IT1Q9HBX3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
SND1-IT1Q9HBX3 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SND1-IT1Q9HBX3 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SND1-IT1Q9HBX3 NALT1-201ENST00000429224 738 ntTSL 5 BASIC12.96□□□□□ -0.33
SND1-IT1Q9HBX3 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms