Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
VCX3BQ9H321 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VCX3BQ9H321 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
VCX3BQ9H321 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VCX3BQ9H321 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
VCX3BQ9H321 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
VCX3BQ9H321 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VCX3BQ9H321 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
VCX3BQ9H321 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
VCX3BQ9H321 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
VCX3BQ9H321 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
VCX3BQ9H321 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.46■□□□□ 0.54
VCX3BQ9H321 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VCX3BQ9H321 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.45■□□□□ 0.54
VCX3BQ9H321 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VCX3BQ9H321 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
VCX3BQ9H321 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
VCX3BQ9H321 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.45■□□□□ 0.54
VCX3BQ9H321 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.45■□□□□ 0.54
VCX3BQ9H321 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
VCX3BQ9H321 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
VCX3BQ9H321 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VCX3BQ9H321 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VCX3BQ9H321 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.45■□□□□ 0.54
VCX3BQ9H321 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.45■□□□□ 0.54
VCX3BQ9H321 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.45■□□□□ 0.54
VCX3BQ9H321 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.45■□□□□ 0.54
VCX3BQ9H321 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.45■□□□□ 0.54
VCX3BQ9H321 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VCX3BQ9H321 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VCX3BQ9H321 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VCX3BQ9H321 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.45■□□□□ 0.54
VCX3BQ9H321 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.45■□□□□ 0.54
VCX3BQ9H321 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
VCX3BQ9H321 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VCX3BQ9H321 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
VCX3BQ9H321 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
VCX3BQ9H321 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.44■□□□□ 0.54
VCX3BQ9H321 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
VCX3BQ9H321 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VCX3BQ9H321 NFIC-211ENST00000641145 8399 ntBASIC18.44■□□□□ 0.54
VCX3BQ9H321 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
VCX3BQ9H321 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VCX3BQ9H321 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VCX3BQ9H321 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VCX3BQ9H321 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VCX3BQ9H321 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VCX3BQ9H321 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
VCX3BQ9H321 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
VCX3BQ9H321 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.44■□□□□ 0.54
VCX3BQ9H321 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
VCX3BQ9H321 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.44■□□□□ 0.54
VCX3BQ9H321 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
VCX3BQ9H321 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VCX3BQ9H321 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.44■□□□□ 0.54
VCX3BQ9H321 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VCX3BQ9H321 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.44■□□□□ 0.54
VCX3BQ9H321 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
VCX3BQ9H321 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
VCX3BQ9H321 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
VCX3BQ9H321 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
VCX3BQ9H321 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VCX3BQ9H321 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
VCX3BQ9H321 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.43■□□□□ 0.54
VCX3BQ9H321 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VCX3BQ9H321 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VCX3BQ9H321 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
VCX3BQ9H321 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VCX3BQ9H321 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VCX3BQ9H321 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
VCX3BQ9H321 PRTG-204ENST00000561292 833 ntTSL 3 BASIC18.43■□□□□ 0.54
VCX3BQ9H321 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.43■□□□□ 0.54
VCX3BQ9H321 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.43■□□□□ 0.54
VCX3BQ9H321 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VCX3BQ9H321 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
VCX3BQ9H321 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VCX3BQ9H321 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.43■□□□□ 0.54
VCX3BQ9H321 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
VCX3BQ9H321 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
VCX3BQ9H321 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
VCX3BQ9H321 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.43■□□□□ 0.54
VCX3BQ9H321 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VCX3BQ9H321 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VCX3BQ9H321 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VCX3BQ9H321 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.43■□□□□ 0.54
VCX3BQ9H321 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VCX3BQ9H321 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VCX3BQ9H321 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VCX3BQ9H321 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.42■□□□□ 0.54
VCX3BQ9H321 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
VCX3BQ9H321 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VCX3BQ9H321 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
VCX3BQ9H321 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VCX3BQ9H321 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VCX3BQ9H321 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
VCX3BQ9H321 TNRC18P3-201ENST00000441896 2691 ntBASIC18.42■□□□□ 0.54
VCX3BQ9H321 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VCX3BQ9H321 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VCX3BQ9H321 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
VCX3BQ9H321 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms