Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
POLR2J3Q9H1A7 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
POLR2J3Q9H1A7 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
POLR2J3Q9H1A7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
POLR2J3Q9H1A7 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.91■□□□□ 0.46
POLR2J3Q9H1A7 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
POLR2J3Q9H1A7 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
POLR2J3Q9H1A7 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
POLR2J3Q9H1A7 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
POLR2J3Q9H1A7 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
POLR2J3Q9H1A7 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.9■□□□□ 0.46
POLR2J3Q9H1A7 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
POLR2J3Q9H1A7 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
POLR2J3Q9H1A7 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
POLR2J3Q9H1A7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
POLR2J3Q9H1A7 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
POLR2J3Q9H1A7 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.9■□□□□ 0.46
POLR2J3Q9H1A7 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.9■□□□□ 0.46
POLR2J3Q9H1A7 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.9■□□□□ 0.46
POLR2J3Q9H1A7 AL137784.2-201ENST00000607332 1000 ntBASIC17.9■□□□□ 0.46
POLR2J3Q9H1A7 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
POLR2J3Q9H1A7 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.9■□□□□ 0.46
POLR2J3Q9H1A7 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
POLR2J3Q9H1A7 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
POLR2J3Q9H1A7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
POLR2J3Q9H1A7 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
POLR2J3Q9H1A7 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
POLR2J3Q9H1A7 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.9■□□□□ 0.46
POLR2J3Q9H1A7 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.89■□□□□ 0.46
POLR2J3Q9H1A7 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
POLR2J3Q9H1A7 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
POLR2J3Q9H1A7 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
POLR2J3Q9H1A7 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
POLR2J3Q9H1A7 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
POLR2J3Q9H1A7 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.89■□□□□ 0.45
POLR2J3Q9H1A7 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.89■□□□□ 0.45
POLR2J3Q9H1A7 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.89■□□□□ 0.45
POLR2J3Q9H1A7 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.89■□□□□ 0.45
POLR2J3Q9H1A7 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
POLR2J3Q9H1A7 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
POLR2J3Q9H1A7 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.89■□□□□ 0.45
POLR2J3Q9H1A7 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
POLR2J3Q9H1A7 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.89■□□□□ 0.45
POLR2J3Q9H1A7 MIR663A-201ENST00000385250 93 ntBASIC17.89■□□□□ 0.45
POLR2J3Q9H1A7 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.89■□□□□ 0.45
POLR2J3Q9H1A7 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
POLR2J3Q9H1A7 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.89■□□□□ 0.45
POLR2J3Q9H1A7 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.89■□□□□ 0.45
POLR2J3Q9H1A7 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.89■□□□□ 0.45
POLR2J3Q9H1A7 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
POLR2J3Q9H1A7 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.89■□□□□ 0.45
POLR2J3Q9H1A7 AC092118.2-201ENST00000613495 667 ntBASIC17.89■□□□□ 0.45
POLR2J3Q9H1A7 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.89■□□□□ 0.45
POLR2J3Q9H1A7 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
POLR2J3Q9H1A7 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.89■□□□□ 0.45
POLR2J3Q9H1A7 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
POLR2J3Q9H1A7 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
POLR2J3Q9H1A7 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.89■□□□□ 0.45
POLR2J3Q9H1A7 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
POLR2J3Q9H1A7 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
POLR2J3Q9H1A7 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
POLR2J3Q9H1A7 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
POLR2J3Q9H1A7 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
POLR2J3Q9H1A7 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
POLR2J3Q9H1A7 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
POLR2J3Q9H1A7 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
POLR2J3Q9H1A7 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
POLR2J3Q9H1A7 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
POLR2J3Q9H1A7 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
POLR2J3Q9H1A7 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
POLR2J3Q9H1A7 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.88■□□□□ 0.45
POLR2J3Q9H1A7 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
POLR2J3Q9H1A7 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
POLR2J3Q9H1A7 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.88■□□□□ 0.45
POLR2J3Q9H1A7 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.88■□□□□ 0.45
POLR2J3Q9H1A7 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
POLR2J3Q9H1A7 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
POLR2J3Q9H1A7 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
POLR2J3Q9H1A7 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.88■□□□□ 0.45
POLR2J3Q9H1A7 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
POLR2J3Q9H1A7 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
POLR2J3Q9H1A7 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
POLR2J3Q9H1A7 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
POLR2J3Q9H1A7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.88■□□□□ 0.45
POLR2J3Q9H1A7 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
POLR2J3Q9H1A7 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.88■□□□□ 0.45
POLR2J3Q9H1A7 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
POLR2J3Q9H1A7 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.88■□□□□ 0.45
POLR2J3Q9H1A7 NEFHP1-201ENST00000412845 2629 ntBASIC17.87■□□□□ 0.45
POLR2J3Q9H1A7 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.87■□□□□ 0.45
POLR2J3Q9H1A7 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
POLR2J3Q9H1A7 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
POLR2J3Q9H1A7 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
POLR2J3Q9H1A7 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
POLR2J3Q9H1A7 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
POLR2J3Q9H1A7 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
POLR2J3Q9H1A7 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.87■□□□□ 0.45
POLR2J3Q9H1A7 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.87■□□□□ 0.45
POLR2J3Q9H1A7 MIPEPP3-201ENST00000412105 444 ntBASIC17.87■□□□□ 0.45
POLR2J3Q9H1A7 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms