Protein–RNA interactions for Protein: Q9C0H6

KLHL4, Kelch-like protein 4, humanhuman

Predictions only

Length 718 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL4Q9C0H6 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KLHL4Q9C0H6 AC116050.2-201ENST00000612102 1779 ntBASIC18.66■□□□□ 0.58
KLHL4Q9C0H6 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KLHL4Q9C0H6 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
KLHL4Q9C0H6 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
KLHL4Q9C0H6 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
KLHL4Q9C0H6 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
KLHL4Q9C0H6 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
KLHL4Q9C0H6 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
KLHL4Q9C0H6 MIR663A-201ENST00000385250 93 ntBASIC18.66■□□□□ 0.58
KLHL4Q9C0H6 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.66■□□□□ 0.58
KLHL4Q9C0H6 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.66■□□□□ 0.58
KLHL4Q9C0H6 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.66■□□□□ 0.58
KLHL4Q9C0H6 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
KLHL4Q9C0H6 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
KLHL4Q9C0H6 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
KLHL4Q9C0H6 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KLHL4Q9C0H6 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
KLHL4Q9C0H6 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KLHL4Q9C0H6 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.66■□□□□ 0.58
KLHL4Q9C0H6 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KLHL4Q9C0H6 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KLHL4Q9C0H6 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.66■□□□□ 0.58
KLHL4Q9C0H6 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
KLHL4Q9C0H6 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.65■□□□□ 0.58
KLHL4Q9C0H6 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
KLHL4Q9C0H6 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KLHL4Q9C0H6 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
KLHL4Q9C0H6 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KLHL4Q9C0H6 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KLHL4Q9C0H6 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.65■□□□□ 0.58
KLHL4Q9C0H6 AC009237.14-201ENST00000609975 1594 ntBASIC18.65■□□□□ 0.58
KLHL4Q9C0H6 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
KLHL4Q9C0H6 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.65■□□□□ 0.58
KLHL4Q9C0H6 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.65■□□□□ 0.58
KLHL4Q9C0H6 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.65■□□□□ 0.58
KLHL4Q9C0H6 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KLHL4Q9C0H6 CROCCP5-201ENST00000436658 830 ntBASIC18.65■□□□□ 0.58
KLHL4Q9C0H6 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KLHL4Q9C0H6 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.65■□□□□ 0.58
KLHL4Q9C0H6 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KLHL4Q9C0H6 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.65■□□□□ 0.58
KLHL4Q9C0H6 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KLHL4Q9C0H6 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
KLHL4Q9C0H6 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KLHL4Q9C0H6 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KLHL4Q9C0H6 NOC2LP1-202ENST00000452600 2235 ntBASIC18.65■□□□□ 0.58
KLHL4Q9C0H6 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KLHL4Q9C0H6 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
KLHL4Q9C0H6 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
KLHL4Q9C0H6 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
KLHL4Q9C0H6 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
KLHL4Q9C0H6 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.64■□□□□ 0.57
KLHL4Q9C0H6 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.64■□□□□ 0.57
KLHL4Q9C0H6 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
KLHL4Q9C0H6 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
KLHL4Q9C0H6 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
KLHL4Q9C0H6 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KLHL4Q9C0H6 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
KLHL4Q9C0H6 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.64■□□□□ 0.57
KLHL4Q9C0H6 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KLHL4Q9C0H6 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
KLHL4Q9C0H6 SLC7A5P2-201ENST00000553010 536 ntBASIC18.64■□□□□ 0.57
KLHL4Q9C0H6 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
KLHL4Q9C0H6 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.64■□□□□ 0.57
KLHL4Q9C0H6 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.64■□□□□ 0.57
KLHL4Q9C0H6 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KLHL4Q9C0H6 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KLHL4Q9C0H6 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KLHL4Q9C0H6 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
KLHL4Q9C0H6 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KLHL4Q9C0H6 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KLHL4Q9C0H6 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KLHL4Q9C0H6 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.64■□□□□ 0.57
KLHL4Q9C0H6 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KLHL4Q9C0H6 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
KLHL4Q9C0H6 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.64■□□□□ 0.57
KLHL4Q9C0H6 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
KLHL4Q9C0H6 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KLHL4Q9C0H6 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KLHL4Q9C0H6 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KLHL4Q9C0H6 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KLHL4Q9C0H6 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
KLHL4Q9C0H6 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
KLHL4Q9C0H6 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KLHL4Q9C0H6 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
KLHL4Q9C0H6 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.63■□□□□ 0.57
KLHL4Q9C0H6 AC007322.1-201ENST00000426983 750 ntBASIC18.63■□□□□ 0.57
KLHL4Q9C0H6 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.63■□□□□ 0.57
KLHL4Q9C0H6 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.63■□□□□ 0.57
KLHL4Q9C0H6 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.63■□□□□ 0.57
KLHL4Q9C0H6 AC231657.2-201ENST00000624556 255 ntBASIC18.63■□□□□ 0.57
KLHL4Q9C0H6 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KLHL4Q9C0H6 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.63■□□□□ 0.57
KLHL4Q9C0H6 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.63■□□□□ 0.57
KLHL4Q9C0H6 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KLHL4Q9C0H6 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
KLHL4Q9C0H6 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KLHL4Q9C0H6 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KLHL4Q9C0H6 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms