Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.09■□□□□ 0.33
VRK1Q99986 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.09■□□□□ 0.33
VRK1Q99986 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VRK1Q99986 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.09■□□□□ 0.33
VRK1Q99986 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.09■□□□□ 0.33
VRK1Q99986 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VRK1Q99986 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
VRK1Q99986 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
VRK1Q99986 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
VRK1Q99986 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
VRK1Q99986 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
VRK1Q99986 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
VRK1Q99986 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
VRK1Q99986 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
VRK1Q99986 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
VRK1Q99986 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.08■□□□□ 0.32
VRK1Q99986 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.08■□□□□ 0.32
VRK1Q99986 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
VRK1Q99986 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.08■□□□□ 0.32
VRK1Q99986 KRASP1-201ENST00000407852 552 ntBASIC17.08■□□□□ 0.32
VRK1Q99986 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.08■□□□□ 0.32
VRK1Q99986 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
VRK1Q99986 AC023632.3-201ENST00000521633 145 ntBASIC17.08■□□□□ 0.32
VRK1Q99986 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.08■□□□□ 0.32
VRK1Q99986 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VRK1Q99986 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VRK1Q99986 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
VRK1Q99986 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.08■□□□□ 0.32
VRK1Q99986 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
VRK1Q99986 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
VRK1Q99986 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
VRK1Q99986 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VRK1Q99986 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.07■□□□□ 0.32
VRK1Q99986 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
VRK1Q99986 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.07■□□□□ 0.32
VRK1Q99986 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VRK1Q99986 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.07■□□□□ 0.32
VRK1Q99986 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VRK1Q99986 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VRK1Q99986 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
VRK1Q99986 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VRK1Q99986 HLA-G-202ENST00000376815 851 ntBASIC17.07■□□□□ 0.32
VRK1Q99986 HLA-G-203ENST00000376818 1127 ntBASIC17.07■□□□□ 0.32
VRK1Q99986 AL596275.1-201ENST00000423464 877 ntBASIC17.07■□□□□ 0.32
VRK1Q99986 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VRK1Q99986 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.07■□□□□ 0.32
VRK1Q99986 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.07■□□□□ 0.32
VRK1Q99986 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.07■□□□□ 0.32
VRK1Q99986 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
VRK1Q99986 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VRK1Q99986 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
VRK1Q99986 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VRK1Q99986 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VRK1Q99986 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VRK1Q99986 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VRK1Q99986 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.07■□□□□ 0.32
VRK1Q99986 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VRK1Q99986 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VRK1Q99986 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VRK1Q99986 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
VRK1Q99986 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
VRK1Q99986 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
VRK1Q99986 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
VRK1Q99986 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VRK1Q99986 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
VRK1Q99986 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
VRK1Q99986 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VRK1Q99986 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VRK1Q99986 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VRK1Q99986 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VRK1Q99986 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VRK1Q99986 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.06■□□□□ 0.32
VRK1Q99986 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.06■□□□□ 0.32
VRK1Q99986 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VRK1Q99986 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.06■□□□□ 0.32
VRK1Q99986 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.06■□□□□ 0.32
VRK1Q99986 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VRK1Q99986 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
VRK1Q99986 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VRK1Q99986 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.06■□□□□ 0.32
VRK1Q99986 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VRK1Q99986 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.06■□□□□ 0.32
VRK1Q99986 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
VRK1Q99986 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
VRK1Q99986 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
VRK1Q99986 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VRK1Q99986 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VRK1Q99986 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.05■□□□□ 0.32
VRK1Q99986 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VRK1Q99986 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
VRK1Q99986 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.05■□□□□ 0.32
VRK1Q99986 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VRK1Q99986 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VRK1Q99986 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
VRK1Q99986 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
VRK1Q99986 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
VRK1Q99986 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VRK1Q99986 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VRK1Q99986 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.05■□□□□ 0.32
VRK1Q99986 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms