Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PHOX2BQ99453 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.6■□□□□ 0.73
PHOX2BQ99453 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
PHOX2BQ99453 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
PHOX2BQ99453 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.6■□□□□ 0.73
PHOX2BQ99453 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PHOX2BQ99453 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PHOX2BQ99453 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PHOX2BQ99453 RCC2P6-201ENST00000526625 1557 ntBASIC19.59■□□□□ 0.73
PHOX2BQ99453 FAM220CP-201ENST00000395253 831 ntBASIC19.59■□□□□ 0.73
PHOX2BQ99453 MRPL3P1-201ENST00000400109 1033 ntBASIC19.59■□□□□ 0.73
PHOX2BQ99453 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PHOX2BQ99453 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.59■□□□□ 0.73
PHOX2BQ99453 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.59■□□□□ 0.73
PHOX2BQ99453 AP002469.2-201ENST00000531724 424 ntBASIC19.59■□□□□ 0.73
PHOX2BQ99453 AC092865.5-201ENST00000545435 363 ntBASIC19.59■□□□□ 0.73
PHOX2BQ99453 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.59■□□□□ 0.73
PHOX2BQ99453 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PHOX2BQ99453 AL355385.1-201ENST00000606123 409 ntBASIC19.59■□□□□ 0.73
PHOX2BQ99453 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
PHOX2BQ99453 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PHOX2BQ99453 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.59■□□□□ 0.73
PHOX2BQ99453 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PHOX2BQ99453 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PHOX2BQ99453 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PHOX2BQ99453 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PHOX2BQ99453 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PHOX2BQ99453 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PHOX2BQ99453 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PHOX2BQ99453 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PHOX2BQ99453 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PHOX2BQ99453 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.73
PHOX2BQ99453 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PHOX2BQ99453 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PHOX2BQ99453 AF106564.1-201ENST00000607058 2553 ntBASIC19.58■□□□□ 0.73
PHOX2BQ99453 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
PHOX2BQ99453 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
PHOX2BQ99453 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.58■□□□□ 0.72
PHOX2BQ99453 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PHOX2BQ99453 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PHOX2BQ99453 MIR574-201ENST00000385209 96 ntBASIC19.58■□□□□ 0.72
PHOX2BQ99453 AC106795.1-205ENST00000512851 1056 ntBASIC19.58■□□□□ 0.72
PHOX2BQ99453 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PHOX2BQ99453 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.58■□□□□ 0.72
PHOX2BQ99453 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PHOX2BQ99453 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
PHOX2BQ99453 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PHOX2BQ99453 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PHOX2BQ99453 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.58■□□□□ 0.72
PHOX2BQ99453 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PHOX2BQ99453 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
PHOX2BQ99453 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.72
PHOX2BQ99453 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
PHOX2BQ99453 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PHOX2BQ99453 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PHOX2BQ99453 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
PHOX2BQ99453 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.58■□□□□ 0.72
PHOX2BQ99453 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
PHOX2BQ99453 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PHOX2BQ99453 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PHOX2BQ99453 AC096733.2-201ENST00000609937 1394 ntBASIC19.57■□□□□ 0.72
PHOX2BQ99453 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.57■□□□□ 0.72
PHOX2BQ99453 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
PHOX2BQ99453 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.57■□□□□ 0.72
PHOX2BQ99453 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PHOX2BQ99453 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PHOX2BQ99453 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PHOX2BQ99453 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PHOX2BQ99453 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PHOX2BQ99453 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.57■□□□□ 0.72
PHOX2BQ99453 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.57■□□□□ 0.72
PHOX2BQ99453 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.57■□□□□ 0.72
PHOX2BQ99453 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.57■□□□□ 0.72
PHOX2BQ99453 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.57■□□□□ 0.72
PHOX2BQ99453 AF228730.7-201ENST00000641842 219 ntBASIC19.57■□□□□ 0.72
PHOX2BQ99453 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PHOX2BQ99453 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PHOX2BQ99453 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PHOX2BQ99453 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PHOX2BQ99453 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PHOX2BQ99453 AC005229.4-201ENST00000610085 2198 ntBASIC19.57■□□□□ 0.72
PHOX2BQ99453 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.57■□□□□ 0.72
PHOX2BQ99453 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PHOX2BQ99453 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.56■□□□□ 0.72
PHOX2BQ99453 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PHOX2BQ99453 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PHOX2BQ99453 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PHOX2BQ99453 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PHOX2BQ99453 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PHOX2BQ99453 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PHOX2BQ99453 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.56■□□□□ 0.72
PHOX2BQ99453 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PHOX2BQ99453 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PHOX2BQ99453 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.56■□□□□ 0.72
PHOX2BQ99453 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.56■□□□□ 0.72
PHOX2BQ99453 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.56■□□□□ 0.72
PHOX2BQ99453 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.56■□□□□ 0.72
PHOX2BQ99453 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.56■□□□□ 0.72
PHOX2BQ99453 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
PHOX2BQ99453 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms