Protein–RNA interactions for Protein: Q8WUY9

DEPDC1B, DEP domain-containing protein 1B, humanhuman

Predictions only

Length 529 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1BQ8WUY9 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
DEPDC1BQ8WUY9 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DEPDC1BQ8WUY9 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DEPDC1BQ8WUY9 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
DEPDC1BQ8WUY9 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
DEPDC1BQ8WUY9 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
DEPDC1BQ8WUY9 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DEPDC1BQ8WUY9 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DEPDC1BQ8WUY9 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.52■□□□□ 0.88
DEPDC1BQ8WUY9 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
DEPDC1BQ8WUY9 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DEPDC1BQ8WUY9 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DEPDC1BQ8WUY9 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
DEPDC1BQ8WUY9 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
DEPDC1BQ8WUY9 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
DEPDC1BQ8WUY9 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.52■□□□□ 0.88
DEPDC1BQ8WUY9 AC113347.1-201ENST00000413321 391 ntBASIC20.52■□□□□ 0.88
DEPDC1BQ8WUY9 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.52■□□□□ 0.88
DEPDC1BQ8WUY9 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
DEPDC1BQ8WUY9 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
DEPDC1BQ8WUY9 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.52■□□□□ 0.88
DEPDC1BQ8WUY9 AL049597.2-201ENST00000565575 961 ntBASIC20.52■□□□□ 0.88
DEPDC1BQ8WUY9 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.52■□□□□ 0.88
DEPDC1BQ8WUY9 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DEPDC1BQ8WUY9 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
DEPDC1BQ8WUY9 KRT8P17-201ENST00000453110 1448 ntBASIC20.52■□□□□ 0.87
DEPDC1BQ8WUY9 KRT18P22-201ENST00000402024 1347 ntBASIC20.52■□□□□ 0.87
DEPDC1BQ8WUY9 AL691432.2-201ENST00000607222 2038 ntBASIC20.51■□□□□ 0.87
DEPDC1BQ8WUY9 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
DEPDC1BQ8WUY9 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
DEPDC1BQ8WUY9 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DEPDC1BQ8WUY9 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.51■□□□□ 0.87
DEPDC1BQ8WUY9 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
DEPDC1BQ8WUY9 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DEPDC1BQ8WUY9 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
DEPDC1BQ8WUY9 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.51■□□□□ 0.87
DEPDC1BQ8WUY9 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.51■□□□□ 0.87
DEPDC1BQ8WUY9 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
DEPDC1BQ8WUY9 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.51■□□□□ 0.87
DEPDC1BQ8WUY9 KRT18P35-201ENST00000510488 1269 ntBASIC20.51■□□□□ 0.87
DEPDC1BQ8WUY9 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
DEPDC1BQ8WUY9 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.51■□□□□ 0.87
DEPDC1BQ8WUY9 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
DEPDC1BQ8WUY9 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
DEPDC1BQ8WUY9 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
DEPDC1BQ8WUY9 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
DEPDC1BQ8WUY9 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.51■□□□□ 0.87
DEPDC1BQ8WUY9 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.51■□□□□ 0.87
DEPDC1BQ8WUY9 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
DEPDC1BQ8WUY9 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.51■□□□□ 0.87
DEPDC1BQ8WUY9 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.51■□□□□ 0.87
DEPDC1BQ8WUY9 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
DEPDC1BQ8WUY9 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.51■□□□□ 0.87
DEPDC1BQ8WUY9 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
DEPDC1BQ8WUY9 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
DEPDC1BQ8WUY9 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
DEPDC1BQ8WUY9 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
DEPDC1BQ8WUY9 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
DEPDC1BQ8WUY9 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
DEPDC1BQ8WUY9 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
DEPDC1BQ8WUY9 AC005521.1-201ENST00000393351 872 ntBASIC20.5■□□□□ 0.87
DEPDC1BQ8WUY9 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.5■□□□□ 0.87
DEPDC1BQ8WUY9 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.5■□□□□ 0.87
DEPDC1BQ8WUY9 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
DEPDC1BQ8WUY9 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.5■□□□□ 0.87
DEPDC1BQ8WUY9 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
DEPDC1BQ8WUY9 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.5■□□□□ 0.87
DEPDC1BQ8WUY9 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.5■□□□□ 0.87
DEPDC1BQ8WUY9 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.5■□□□□ 0.87
DEPDC1BQ8WUY9 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.5■□□□□ 0.87
DEPDC1BQ8WUY9 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
DEPDC1BQ8WUY9 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.5■□□□□ 0.87
DEPDC1BQ8WUY9 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
DEPDC1BQ8WUY9 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
DEPDC1BQ8WUY9 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
DEPDC1BQ8WUY9 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.49■□□□□ 0.87
DEPDC1BQ8WUY9 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
DEPDC1BQ8WUY9 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
DEPDC1BQ8WUY9 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.49■□□□□ 0.87
DEPDC1BQ8WUY9 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
DEPDC1BQ8WUY9 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.49■□□□□ 0.87
DEPDC1BQ8WUY9 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.49■□□□□ 0.87
DEPDC1BQ8WUY9 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
DEPDC1BQ8WUY9 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
DEPDC1BQ8WUY9 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
DEPDC1BQ8WUY9 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.49■□□□□ 0.87
DEPDC1BQ8WUY9 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
DEPDC1BQ8WUY9 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
DEPDC1BQ8WUY9 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
DEPDC1BQ8WUY9 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
DEPDC1BQ8WUY9 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
DEPDC1BQ8WUY9 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.48■□□□□ 0.87
DEPDC1BQ8WUY9 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DEPDC1BQ8WUY9 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
DEPDC1BQ8WUY9 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DEPDC1BQ8WUY9 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DEPDC1BQ8WUY9 ARMC10P1-201ENST00000313754 855 ntBASIC20.48■□□□□ 0.87
DEPDC1BQ8WUY9 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DEPDC1BQ8WUY9 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
DEPDC1BQ8WUY9 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms