Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.37■□□□□ 0.85
RNF139Q8WU17 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF139Q8WU17 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
RNF139Q8WU17 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RNF139Q8WU17 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF139Q8WU17 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF139Q8WU17 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF139Q8WU17 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
RNF139Q8WU17 AL596275.1-201ENST00000423464 877 ntBASIC20.37■□□□□ 0.85
RNF139Q8WU17 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF139Q8WU17 KSR1P1-201ENST00000446298 240 ntBASIC20.37■□□□□ 0.85
RNF139Q8WU17 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RNF139Q8WU17 MIR4497-201ENST00000583208 89 ntBASIC20.37■□□□□ 0.85
RNF139Q8WU17 CD177P1-201ENST00000606252 935 ntBASIC20.37■□□□□ 0.85
RNF139Q8WU17 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
RNF139Q8WU17 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF139Q8WU17 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
RNF139Q8WU17 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF139Q8WU17 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RNF139Q8WU17 TREX1-205ENST00000625293 1783 ntBASIC20.36■□□□□ 0.85
RNF139Q8WU17 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF139Q8WU17 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNF139Q8WU17 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNF139Q8WU17 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.36■□□□□ 0.85
RNF139Q8WU17 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF139Q8WU17 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF139Q8WU17 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF139Q8WU17 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF139Q8WU17 FAM197Y1-201ENST00000421178 764 ntBASIC20.36■□□□□ 0.85
RNF139Q8WU17 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.36■□□□□ 0.85
RNF139Q8WU17 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.36■□□□□ 0.85
RNF139Q8WU17 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.36■□□□□ 0.85
RNF139Q8WU17 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.36■□□□□ 0.85
RNF139Q8WU17 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF139Q8WU17 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
RNF139Q8WU17 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.36■□□□□ 0.85
RNF139Q8WU17 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF139Q8WU17 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.36■□□□□ 0.85
RNF139Q8WU17 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF139Q8WU17 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF139Q8WU17 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF139Q8WU17 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
RNF139Q8WU17 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF139Q8WU17 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.35■□□□□ 0.85
RNF139Q8WU17 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
RNF139Q8WU17 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.35■□□□□ 0.85
RNF139Q8WU17 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF139Q8WU17 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.35■□□□□ 0.85
RNF139Q8WU17 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF139Q8WU17 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RNF139Q8WU17 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF139Q8WU17 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.35■□□□□ 0.85
RNF139Q8WU17 TSPY7P-201ENST00000431358 1114 ntBASIC20.35■□□□□ 0.85
RNF139Q8WU17 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF139Q8WU17 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.35■□□□□ 0.85
RNF139Q8WU17 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.35■□□□□ 0.85
RNF139Q8WU17 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.35■□□□□ 0.85
RNF139Q8WU17 CR392000.1-201ENST00000624770 1228 ntBASIC20.35■□□□□ 0.85
RNF139Q8WU17 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF139Q8WU17 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF139Q8WU17 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF139Q8WU17 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
RNF139Q8WU17 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF139Q8WU17 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.35■□□□□ 0.85
RNF139Q8WU17 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF139Q8WU17 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF139Q8WU17 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.34■□□□□ 0.85
RNF139Q8WU17 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.34■□□□□ 0.85
RNF139Q8WU17 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF139Q8WU17 KRT17P2-201ENST00000300992 1314 ntBASIC20.34■□□□□ 0.85
RNF139Q8WU17 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF139Q8WU17 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF139Q8WU17 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNF139Q8WU17 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
RNF139Q8WU17 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF139Q8WU17 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF139Q8WU17 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.34■□□□□ 0.85
RNF139Q8WU17 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
RNF139Q8WU17 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
RNF139Q8WU17 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNF139Q8WU17 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.34■□□□□ 0.85
RNF139Q8WU17 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.34■□□□□ 0.85
RNF139Q8WU17 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNF139Q8WU17 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.34■□□□□ 0.85
RNF139Q8WU17 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF139Q8WU17 KRT16P1-201ENST00000399124 1418 ntBASIC20.34■□□□□ 0.85
RNF139Q8WU17 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RNF139Q8WU17 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.34■□□□□ 0.85
RNF139Q8WU17 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF139Q8WU17 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF139Q8WU17 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
RNF139Q8WU17 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RNF139Q8WU17 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF139Q8WU17 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.33■□□□□ 0.85
RNF139Q8WU17 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
RNF139Q8WU17 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.33■□□□□ 0.85
RNF139Q8WU17 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF139Q8WU17 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF139Q8WU17 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
RNF139Q8WU17 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms