Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LSMEM1Q8N8F7 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LSMEM1Q8N8F7 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LSMEM1Q8N8F7 HLA-L-209ENST00000420110 1011 ntBASIC17.74■□□□□ 0.43
LSMEM1Q8N8F7 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.74■□□□□ 0.43
LSMEM1Q8N8F7 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.74■□□□□ 0.43
LSMEM1Q8N8F7 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.74■□□□□ 0.43
LSMEM1Q8N8F7 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.74■□□□□ 0.43
LSMEM1Q8N8F7 KRT18P16-201ENST00000510337 1294 ntBASIC17.74■□□□□ 0.43
LSMEM1Q8N8F7 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.74■□□□□ 0.43
LSMEM1Q8N8F7 UNC93B5-201ENST00000530315 699 ntBASIC17.74■□□□□ 0.43
LSMEM1Q8N8F7 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
LSMEM1Q8N8F7 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.74■□□□□ 0.43
LSMEM1Q8N8F7 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LSMEM1Q8N8F7 AP000974.1-201ENST00000623909 2387 ntBASIC17.74■□□□□ 0.43
LSMEM1Q8N8F7 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.74■□□□□ 0.43
LSMEM1Q8N8F7 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.74■□□□□ 0.43
LSMEM1Q8N8F7 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.74■□□□□ 0.43
LSMEM1Q8N8F7 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LSMEM1Q8N8F7 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
LSMEM1Q8N8F7 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LSMEM1Q8N8F7 AC098818.2-201ENST00000564925 2320 ntBASIC17.73■□□□□ 0.43
LSMEM1Q8N8F7 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LSMEM1Q8N8F7 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.73■□□□□ 0.43
LSMEM1Q8N8F7 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.73■□□□□ 0.43
LSMEM1Q8N8F7 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LSMEM1Q8N8F7 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LSMEM1Q8N8F7 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LSMEM1Q8N8F7 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.73■□□□□ 0.43
LSMEM1Q8N8F7 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.73■□□□□ 0.43
LSMEM1Q8N8F7 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.73■□□□□ 0.43
LSMEM1Q8N8F7 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
LSMEM1Q8N8F7 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.73■□□□□ 0.43
LSMEM1Q8N8F7 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
LSMEM1Q8N8F7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LSMEM1Q8N8F7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LSMEM1Q8N8F7 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.73■□□□□ 0.43
LSMEM1Q8N8F7 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LSMEM1Q8N8F7 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
LSMEM1Q8N8F7 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LSMEM1Q8N8F7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LSMEM1Q8N8F7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.73■□□□□ 0.43
LSMEM1Q8N8F7 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.73■□□□□ 0.43
LSMEM1Q8N8F7 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.72■□□□□ 0.43
LSMEM1Q8N8F7 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
LSMEM1Q8N8F7 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
LSMEM1Q8N8F7 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
LSMEM1Q8N8F7 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
LSMEM1Q8N8F7 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LSMEM1Q8N8F7 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LSMEM1Q8N8F7 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
LSMEM1Q8N8F7 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LSMEM1Q8N8F7 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.72■□□□□ 0.43
LSMEM1Q8N8F7 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.72■□□□□ 0.43
LSMEM1Q8N8F7 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LSMEM1Q8N8F7 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LSMEM1Q8N8F7 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LSMEM1Q8N8F7 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.72■□□□□ 0.43
LSMEM1Q8N8F7 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LSMEM1Q8N8F7 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
LSMEM1Q8N8F7 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
LSMEM1Q8N8F7 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LSMEM1Q8N8F7 AL355802.2-201ENST00000402069 882 ntBASIC17.72■□□□□ 0.43
LSMEM1Q8N8F7 POM121L13P-201ENST00000422362 380 ntBASIC17.72■□□□□ 0.43
LSMEM1Q8N8F7 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.72■□□□□ 0.43
LSMEM1Q8N8F7 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
LSMEM1Q8N8F7 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.72■□□□□ 0.43
LSMEM1Q8N8F7 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.72■□□□□ 0.43
LSMEM1Q8N8F7 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LSMEM1Q8N8F7 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
LSMEM1Q8N8F7 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LSMEM1Q8N8F7 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LSMEM1Q8N8F7 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
LSMEM1Q8N8F7 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LSMEM1Q8N8F7 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LSMEM1Q8N8F7 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
LSMEM1Q8N8F7 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
LSMEM1Q8N8F7 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LSMEM1Q8N8F7 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LSMEM1Q8N8F7 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
LSMEM1Q8N8F7 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.71■□□□□ 0.43
LSMEM1Q8N8F7 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LSMEM1Q8N8F7 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LSMEM1Q8N8F7 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.71■□□□□ 0.43
LSMEM1Q8N8F7 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.71■□□□□ 0.43
LSMEM1Q8N8F7 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.71■□□□□ 0.43
LSMEM1Q8N8F7 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.71■□□□□ 0.43
LSMEM1Q8N8F7 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.71■□□□□ 0.43
LSMEM1Q8N8F7 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.71■□□□□ 0.43
LSMEM1Q8N8F7 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LSMEM1Q8N8F7 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
LSMEM1Q8N8F7 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LSMEM1Q8N8F7 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
LSMEM1Q8N8F7 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LSMEM1Q8N8F7 AC104417.2-201ENST00000562989 1793 ntBASIC17.71■□□□□ 0.43
LSMEM1Q8N8F7 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LSMEM1Q8N8F7 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LSMEM1Q8N8F7 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
LSMEM1Q8N8F7 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
LSMEM1Q8N8F7 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms