Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
DDX60Q8IY21 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC23.98■■□□□ 1.43
DDX60Q8IY21 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
DDX60Q8IY21 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
DDX60Q8IY21 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC23.98■■□□□ 1.43
DDX60Q8IY21 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
DDX60Q8IY21 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC23.98■■□□□ 1.43
DDX60Q8IY21 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC23.98■■□□□ 1.43
DDX60Q8IY21 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC23.98■■□□□ 1.43
DDX60Q8IY21 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
DDX60Q8IY21 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
DDX60Q8IY21 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
DDX60Q8IY21 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
DDX60Q8IY21 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC23.98■■□□□ 1.43
DDX60Q8IY21 LINC01521-201ENST00000504184 1943 ntBASIC23.98■■□□□ 1.43
DDX60Q8IY21 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
DDX60Q8IY21 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
DDX60Q8IY21 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC23.98■■□□□ 1.43
DDX60Q8IY21 METTL23-204ENST00000586752 904 ntTSL 2 BASIC23.98■■□□□ 1.43
DDX60Q8IY21 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC23.98■■□□□ 1.43
DDX60Q8IY21 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
DDX60Q8IY21 AC104417.2-201ENST00000562989 1793 ntBASIC23.98■■□□□ 1.43
DDX60Q8IY21 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
DDX60Q8IY21 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
DDX60Q8IY21 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC23.97■■□□□ 1.43
DDX60Q8IY21 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
DDX60Q8IY21 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
DDX60Q8IY21 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
DDX60Q8IY21 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
DDX60Q8IY21 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
DDX60Q8IY21 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC23.97■■□□□ 1.43
DDX60Q8IY21 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC23.97■■□□□ 1.43
DDX60Q8IY21 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC23.97■■□□□ 1.43
DDX60Q8IY21 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
DDX60Q8IY21 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
DDX60Q8IY21 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC23.97■■□□□ 1.43
DDX60Q8IY21 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
DDX60Q8IY21 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
DDX60Q8IY21 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
DDX60Q8IY21 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
DDX60Q8IY21 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC23.96■■□□□ 1.43
DDX60Q8IY21 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
DDX60Q8IY21 ILF2-202ENST00000368681 726 ntTSL 2 BASIC23.96■■□□□ 1.43
DDX60Q8IY21 AC009947.2-201ENST00000444014 672 ntBASIC23.96■■□□□ 1.43
DDX60Q8IY21 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC23.96■■□□□ 1.43
DDX60Q8IY21 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC23.96■■□□□ 1.43
DDX60Q8IY21 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC23.96■■□□□ 1.43
DDX60Q8IY21 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
DDX60Q8IY21 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC23.96■■□□□ 1.43
DDX60Q8IY21 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
DDX60Q8IY21 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
DDX60Q8IY21 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
DDX60Q8IY21 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
DDX60Q8IY21 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
DDX60Q8IY21 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
DDX60Q8IY21 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
DDX60Q8IY21 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
DDX60Q8IY21 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
DDX60Q8IY21 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
DDX60Q8IY21 RNF152P1-201ENST00000397754 604 ntBASIC23.96■■□□□ 1.43
DDX60Q8IY21 KRT18P38-201ENST00000449496 1282 ntBASIC23.96■■□□□ 1.43
DDX60Q8IY21 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC23.96■■□□□ 1.43
DDX60Q8IY21 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
DDX60Q8IY21 NMU-205ENST00000511469 756 ntTSL 3 BASIC23.96■■□□□ 1.43
DDX60Q8IY21 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC23.96■■□□□ 1.43
DDX60Q8IY21 USF2-205ENST00000594064 1179 ntTSL 2 BASIC23.96■■□□□ 1.43
DDX60Q8IY21 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC23.96■■□□□ 1.43
DDX60Q8IY21 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC23.96■■□□□ 1.43
DDX60Q8IY21 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC23.96■■□□□ 1.43
DDX60Q8IY21 AC116407.4-201ENST00000623319 1061 ntBASIC23.96■■□□□ 1.43
DDX60Q8IY21 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC23.95■■□□□ 1.43
DDX60Q8IY21 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC23.95■■□□□ 1.43
DDX60Q8IY21 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC23.95■■□□□ 1.43
DDX60Q8IY21 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC23.95■■□□□ 1.43
DDX60Q8IY21 USP39-204ENST00000409766 2033 ntTSL 2 BASIC23.95■■□□□ 1.43
DDX60Q8IY21 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
DDX60Q8IY21 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
DDX60Q8IY21 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
DDX60Q8IY21 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
DDX60Q8IY21 COPS8-203ENST00000409334 794 ntTSL 5 BASIC23.95■■□□□ 1.42
DDX60Q8IY21 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC23.95■■□□□ 1.42
DDX60Q8IY21 NT5C-210ENST00000582160 860 ntTSL 2 BASIC23.95■■□□□ 1.42
DDX60Q8IY21 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC23.95■■□□□ 1.42
DDX60Q8IY21 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
DDX60Q8IY21 KRT8P45-201ENST00000414328 1447 ntBASIC23.95■■□□□ 1.42
DDX60Q8IY21 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC23.95■■□□□ 1.42
DDX60Q8IY21 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
DDX60Q8IY21 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC23.95■■□□□ 1.42
DDX60Q8IY21 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
DDX60Q8IY21 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
DDX60Q8IY21 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
DDX60Q8IY21 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
DDX60Q8IY21 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
DDX60Q8IY21 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
DDX60Q8IY21 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
DDX60Q8IY21 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC23.94■■□□□ 1.42
DDX60Q8IY21 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC23.94■■□□□ 1.42
DDX60Q8IY21 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
DDX60Q8IY21 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
DDX60Q8IY21 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC23.94■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms