Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CROCCP3Q8IVE0 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.56■□□□□ 0.4
CROCCP3Q8IVE0 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.56■□□□□ 0.4
CROCCP3Q8IVE0 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CROCCP3Q8IVE0 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.56■□□□□ 0.4
CROCCP3Q8IVE0 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.56■□□□□ 0.4
CROCCP3Q8IVE0 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CROCCP3Q8IVE0 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CROCCP3Q8IVE0 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CROCCP3Q8IVE0 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.55■□□□□ 0.4
CROCCP3Q8IVE0 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CROCCP3Q8IVE0 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CROCCP3Q8IVE0 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CROCCP3Q8IVE0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CROCCP3Q8IVE0 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
CROCCP3Q8IVE0 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CROCCP3Q8IVE0 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CROCCP3Q8IVE0 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CROCCP3Q8IVE0 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CROCCP3Q8IVE0 AL391005.1-201ENST00000623953 2435 ntBASIC17.55■□□□□ 0.4
CROCCP3Q8IVE0 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CROCCP3Q8IVE0 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CROCCP3Q8IVE0 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CROCCP3Q8IVE0 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CROCCP3Q8IVE0 AC008175.2-201ENST00000612840 297 ntBASIC17.55■□□□□ 0.4
CROCCP3Q8IVE0 RASSF1-AS1-201ENST00000629828 790 ntBASIC17.55■□□□□ 0.4
CROCCP3Q8IVE0 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
CROCCP3Q8IVE0 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CROCCP3Q8IVE0 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CROCCP3Q8IVE0 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
CROCCP3Q8IVE0 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CROCCP3Q8IVE0 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CROCCP3Q8IVE0 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.55■□□□□ 0.4
CROCCP3Q8IVE0 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.54■□□□□ 0.4
CROCCP3Q8IVE0 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CROCCP3Q8IVE0 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CROCCP3Q8IVE0 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CROCCP3Q8IVE0 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CROCCP3Q8IVE0 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CROCCP3Q8IVE0 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.54■□□□□ 0.4
CROCCP3Q8IVE0 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CROCCP3Q8IVE0 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.54■□□□□ 0.4
CROCCP3Q8IVE0 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.54■□□□□ 0.4
CROCCP3Q8IVE0 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CROCCP3Q8IVE0 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CROCCP3Q8IVE0 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.54■□□□□ 0.4
CROCCP3Q8IVE0 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.54■□□□□ 0.4
CROCCP3Q8IVE0 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CROCCP3Q8IVE0 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CROCCP3Q8IVE0 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CROCCP3Q8IVE0 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CROCCP3Q8IVE0 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CROCCP3Q8IVE0 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CROCCP3Q8IVE0 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CROCCP3Q8IVE0 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.54■□□□□ 0.4
CROCCP3Q8IVE0 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CROCCP3Q8IVE0 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CROCCP3Q8IVE0 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CROCCP3Q8IVE0 AC116050.2-201ENST00000612102 1779 ntBASIC17.53■□□□□ 0.4
CROCCP3Q8IVE0 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CROCCP3Q8IVE0 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CROCCP3Q8IVE0 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CROCCP3Q8IVE0 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
CROCCP3Q8IVE0 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CROCCP3Q8IVE0 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.53■□□□□ 0.4
CROCCP3Q8IVE0 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.53■□□□□ 0.4
CROCCP3Q8IVE0 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CROCCP3Q8IVE0 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CROCCP3Q8IVE0 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CROCCP3Q8IVE0 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CROCCP3Q8IVE0 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CROCCP3Q8IVE0 DPP3P2-201ENST00000416030 1696 ntBASIC17.53■□□□□ 0.4
CROCCP3Q8IVE0 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CROCCP3Q8IVE0 AC245052.3-201ENST00000450182 901 ntBASIC17.53■□□□□ 0.4
CROCCP3Q8IVE0 AC009299.2-201ENST00000482477 511 ntBASIC17.53■□□□□ 0.4
CROCCP3Q8IVE0 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.53■□□□□ 0.4
CROCCP3Q8IVE0 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CROCCP3Q8IVE0 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.53■□□□□ 0.4
CROCCP3Q8IVE0 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
CROCCP3Q8IVE0 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.53■□□□□ 0.4
CROCCP3Q8IVE0 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CROCCP3Q8IVE0 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CROCCP3Q8IVE0 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CROCCP3Q8IVE0 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CROCCP3Q8IVE0 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.53■□□□□ 0.4
CROCCP3Q8IVE0 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CROCCP3Q8IVE0 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CROCCP3Q8IVE0 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CROCCP3Q8IVE0 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.53■□□□□ 0.4
CROCCP3Q8IVE0 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CROCCP3Q8IVE0 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CROCCP3Q8IVE0 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CROCCP3Q8IVE0 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CROCCP3Q8IVE0 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.52■□□□□ 0.4
CROCCP3Q8IVE0 ESPNP-201ENST00000270691 2015 ntBASIC17.52■□□□□ 0.4
CROCCP3Q8IVE0 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CROCCP3Q8IVE0 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.52■□□□□ 0.4
CROCCP3Q8IVE0 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.52■□□□□ 0.4
CROCCP3Q8IVE0 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CROCCP3Q8IVE0 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms