Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.76■□□□□ 0.75
CASC4Q6P4E1 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.76■□□□□ 0.75
CASC4Q6P4E1 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CASC4Q6P4E1 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CASC4Q6P4E1 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CASC4Q6P4E1 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CASC4Q6P4E1 AC073210.2-201ENST00000430369 194 ntBASIC19.76■□□□□ 0.75
CASC4Q6P4E1 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CASC4Q6P4E1 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.76■□□□□ 0.75
CASC4Q6P4E1 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.76■□□□□ 0.75
CASC4Q6P4E1 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.76■□□□□ 0.75
CASC4Q6P4E1 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CASC4Q6P4E1 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.76■□□□□ 0.75
CASC4Q6P4E1 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CASC4Q6P4E1 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CASC4Q6P4E1 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CASC4Q6P4E1 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.75■□□□□ 0.75
CASC4Q6P4E1 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CASC4Q6P4E1 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.75■□□□□ 0.75
CASC4Q6P4E1 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CASC4Q6P4E1 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CASC4Q6P4E1 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CASC4Q6P4E1 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.75■□□□□ 0.75
CASC4Q6P4E1 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.75■□□□□ 0.75
CASC4Q6P4E1 TSPY6P-201ENST00000448518 926 ntBASIC19.75■□□□□ 0.75
CASC4Q6P4E1 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CASC4Q6P4E1 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.75■□□□□ 0.75
CASC4Q6P4E1 MIR4758-201ENST00000577688 71 ntBASIC19.75■□□□□ 0.75
CASC4Q6P4E1 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CASC4Q6P4E1 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CASC4Q6P4E1 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CASC4Q6P4E1 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CASC4Q6P4E1 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.75■□□□□ 0.75
CASC4Q6P4E1 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CASC4Q6P4E1 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.75■□□□□ 0.75
CASC4Q6P4E1 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CASC4Q6P4E1 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CASC4Q6P4E1 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CASC4Q6P4E1 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CASC4Q6P4E1 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CASC4Q6P4E1 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CASC4Q6P4E1 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CASC4Q6P4E1 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CASC4Q6P4E1 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CASC4Q6P4E1 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.74■□□□□ 0.75
CASC4Q6P4E1 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.74■□□□□ 0.75
CASC4Q6P4E1 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CASC4Q6P4E1 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CASC4Q6P4E1 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CASC4Q6P4E1 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CASC4Q6P4E1 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.74■□□□□ 0.75
CASC4Q6P4E1 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.74■□□□□ 0.75
CASC4Q6P4E1 NCF1B-203ENST00000435988 1254 ntBASIC19.74■□□□□ 0.75
CASC4Q6P4E1 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CASC4Q6P4E1 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.74■□□□□ 0.75
CASC4Q6P4E1 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CASC4Q6P4E1 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.74■□□□□ 0.75
CASC4Q6P4E1 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CASC4Q6P4E1 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CASC4Q6P4E1 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.74■□□□□ 0.75
CASC4Q6P4E1 AC092368.3-202ENST00000574180 1591 ntBASIC19.74■□□□□ 0.75
CASC4Q6P4E1 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CASC4Q6P4E1 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CASC4Q6P4E1 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CASC4Q6P4E1 HTR7P1-202ENST00000624664 4411 ntBASIC19.73■□□□□ 0.75
CASC4Q6P4E1 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CASC4Q6P4E1 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.73■□□□□ 0.75
CASC4Q6P4E1 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.73■□□□□ 0.75
CASC4Q6P4E1 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CASC4Q6P4E1 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CASC4Q6P4E1 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CASC4Q6P4E1 GUSBP6-202ENST00000438529 1198 ntBASIC19.73■□□□□ 0.75
CASC4Q6P4E1 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.73■□□□□ 0.75
CASC4Q6P4E1 RPS2P52-201ENST00000469610 820 ntBASIC19.73■□□□□ 0.75
CASC4Q6P4E1 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.73■□□□□ 0.75
CASC4Q6P4E1 AC097658.1-201ENST00000475555 843 ntBASIC19.73■□□□□ 0.75
CASC4Q6P4E1 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.73■□□□□ 0.75
CASC4Q6P4E1 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.73■□□□□ 0.75
CASC4Q6P4E1 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.73■□□□□ 0.75
CASC4Q6P4E1 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.73■□□□□ 0.75
CASC4Q6P4E1 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.73■□□□□ 0.75
CASC4Q6P4E1 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CASC4Q6P4E1 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CASC4Q6P4E1 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CASC4Q6P4E1 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CASC4Q6P4E1 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CASC4Q6P4E1 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
CASC4Q6P4E1 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CASC4Q6P4E1 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
CASC4Q6P4E1 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CASC4Q6P4E1 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.72■□□□□ 0.75
CASC4Q6P4E1 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
CASC4Q6P4E1 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CASC4Q6P4E1 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CASC4Q6P4E1 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CASC4Q6P4E1 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CASC4Q6P4E1 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CASC4Q6P4E1 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CASC4Q6P4E1 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CASC4Q6P4E1 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms