Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KHDC1Q4VXA5 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.6■□□□□ 0.73
KHDC1Q4VXA5 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.6■□□□□ 0.73
KHDC1Q4VXA5 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KHDC1Q4VXA5 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.6■□□□□ 0.73
KHDC1Q4VXA5 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KHDC1Q4VXA5 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
KHDC1Q4VXA5 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
KHDC1Q4VXA5 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KHDC1Q4VXA5 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.6■□□□□ 0.73
KHDC1Q4VXA5 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KHDC1Q4VXA5 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
KHDC1Q4VXA5 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
KHDC1Q4VXA5 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KHDC1Q4VXA5 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KHDC1Q4VXA5 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.59■□□□□ 0.73
KHDC1Q4VXA5 PHGDH-210ENST00000641115 1638 ntBASIC19.59■□□□□ 0.73
KHDC1Q4VXA5 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KHDC1Q4VXA5 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KHDC1Q4VXA5 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.59■□□□□ 0.73
KHDC1Q4VXA5 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.59■□□□□ 0.73
KHDC1Q4VXA5 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
KHDC1Q4VXA5 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.59■□□□□ 0.73
KHDC1Q4VXA5 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.59■□□□□ 0.73
KHDC1Q4VXA5 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
KHDC1Q4VXA5 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.59■□□□□ 0.73
KHDC1Q4VXA5 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.59■□□□□ 0.73
KHDC1Q4VXA5 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
KHDC1Q4VXA5 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
KHDC1Q4VXA5 AC018553.1-201ENST00000616682 1458 ntBASIC19.59■□□□□ 0.73
KHDC1Q4VXA5 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KHDC1Q4VXA5 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
KHDC1Q4VXA5 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KHDC1Q4VXA5 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
KHDC1Q4VXA5 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KHDC1Q4VXA5 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KHDC1Q4VXA5 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.59■□□□□ 0.73
KHDC1Q4VXA5 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
KHDC1Q4VXA5 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
KHDC1Q4VXA5 AC116351.2-201ENST00000606540 1585 ntBASIC19.58■□□□□ 0.73
KHDC1Q4VXA5 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
KHDC1Q4VXA5 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
KHDC1Q4VXA5 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.58■□□□□ 0.72
KHDC1Q4VXA5 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.58■□□□□ 0.72
KHDC1Q4VXA5 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
KHDC1Q4VXA5 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
KHDC1Q4VXA5 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
KHDC1Q4VXA5 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.58■□□□□ 0.72
KHDC1Q4VXA5 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.58■□□□□ 0.72
KHDC1Q4VXA5 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.58■□□□□ 0.72
KHDC1Q4VXA5 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
KHDC1Q4VXA5 AL121829.2-201ENST00000620908 328 ntBASIC19.58■□□□□ 0.72
KHDC1Q4VXA5 AL023875.1-201ENST00000640777 796 ntBASIC19.58■□□□□ 0.72
KHDC1Q4VXA5 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.58■□□□□ 0.72
KHDC1Q4VXA5 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
KHDC1Q4VXA5 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
KHDC1Q4VXA5 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
KHDC1Q4VXA5 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
KHDC1Q4VXA5 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
KHDC1Q4VXA5 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KHDC1Q4VXA5 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KHDC1Q4VXA5 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.57■□□□□ 0.72
KHDC1Q4VXA5 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
KHDC1Q4VXA5 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.57■□□□□ 0.72
KHDC1Q4VXA5 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.57■□□□□ 0.72
KHDC1Q4VXA5 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
KHDC1Q4VXA5 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KHDC1Q4VXA5 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
KHDC1Q4VXA5 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
KHDC1Q4VXA5 GCSHP5-201ENST00000443090 522 ntBASIC19.57■□□□□ 0.72
KHDC1Q4VXA5 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.57■□□□□ 0.72
KHDC1Q4VXA5 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.57■□□□□ 0.72
KHDC1Q4VXA5 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.57■□□□□ 0.72
KHDC1Q4VXA5 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.57■□□□□ 0.72
KHDC1Q4VXA5 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.57■□□□□ 0.72
KHDC1Q4VXA5 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
KHDC1Q4VXA5 AL121906.2-201ENST00000621597 723 ntBASIC19.57■□□□□ 0.72
KHDC1Q4VXA5 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.57■□□□□ 0.72
KHDC1Q4VXA5 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.57■□□□□ 0.72
KHDC1Q4VXA5 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
KHDC1Q4VXA5 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KHDC1Q4VXA5 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
KHDC1Q4VXA5 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KHDC1Q4VXA5 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KHDC1Q4VXA5 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
KHDC1Q4VXA5 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.57■□□□□ 0.72
KHDC1Q4VXA5 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
KHDC1Q4VXA5 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KHDC1Q4VXA5 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
KHDC1Q4VXA5 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
KHDC1Q4VXA5 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
KHDC1Q4VXA5 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KHDC1Q4VXA5 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
KHDC1Q4VXA5 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
KHDC1Q4VXA5 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
KHDC1Q4VXA5 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.56■□□□□ 0.72
KHDC1Q4VXA5 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
KHDC1Q4VXA5 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
KHDC1Q4VXA5 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
KHDC1Q4VXA5 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms