Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ERCC6LQ2NKX8 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ERCC6LQ2NKX8 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ERCC6LQ2NKX8 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
ERCC6LQ2NKX8 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
ERCC6LQ2NKX8 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.51■□□□□ 0.87
ERCC6LQ2NKX8 KRT16P6-202ENST00000425692 1426 ntBASIC20.51■□□□□ 0.87
ERCC6LQ2NKX8 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ERCC6LQ2NKX8 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ERCC6LQ2NKX8 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ERCC6LQ2NKX8 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ERCC6LQ2NKX8 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.51■□□□□ 0.87
ERCC6LQ2NKX8 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.5■□□□□ 0.87
ERCC6LQ2NKX8 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ERCC6LQ2NKX8 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
ERCC6LQ2NKX8 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.5■□□□□ 0.87
ERCC6LQ2NKX8 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
ERCC6LQ2NKX8 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
ERCC6LQ2NKX8 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.5■□□□□ 0.87
ERCC6LQ2NKX8 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.5■□□□□ 0.87
ERCC6LQ2NKX8 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
ERCC6LQ2NKX8 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
ERCC6LQ2NKX8 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ERCC6LQ2NKX8 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
ERCC6LQ2NKX8 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ERCC6LQ2NKX8 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ERCC6LQ2NKX8 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ERCC6LQ2NKX8 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ERCC6LQ2NKX8 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ERCC6LQ2NKX8 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
ERCC6LQ2NKX8 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ERCC6LQ2NKX8 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
ERCC6LQ2NKX8 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
ERCC6LQ2NKX8 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ERCC6LQ2NKX8 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ERCC6LQ2NKX8 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ERCC6LQ2NKX8 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
ERCC6LQ2NKX8 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ERCC6LQ2NKX8 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.49■□□□□ 0.87
ERCC6LQ2NKX8 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.49■□□□□ 0.87
ERCC6LQ2NKX8 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ERCC6LQ2NKX8 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.49■□□□□ 0.87
ERCC6LQ2NKX8 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.49■□□□□ 0.87
ERCC6LQ2NKX8 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ERCC6LQ2NKX8 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
ERCC6LQ2NKX8 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.49■□□□□ 0.87
ERCC6LQ2NKX8 MIR4767-201ENST00000582827 78 ntBASIC20.49■□□□□ 0.87
ERCC6LQ2NKX8 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.49■□□□□ 0.87
ERCC6LQ2NKX8 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
ERCC6LQ2NKX8 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
ERCC6LQ2NKX8 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ERCC6LQ2NKX8 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ERCC6LQ2NKX8 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
ERCC6LQ2NKX8 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
ERCC6LQ2NKX8 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.49■□□□□ 0.87
ERCC6LQ2NKX8 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.49■□□□□ 0.87
ERCC6LQ2NKX8 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.49■□□□□ 0.87
ERCC6LQ2NKX8 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.49■□□□□ 0.87
ERCC6LQ2NKX8 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.49■□□□□ 0.87
ERCC6LQ2NKX8 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
ERCC6LQ2NKX8 AC009053.2-201ENST00000563701 2365 ntBASIC20.49■□□□□ 0.87
ERCC6LQ2NKX8 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
ERCC6LQ2NKX8 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ERCC6LQ2NKX8 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.48■□□□□ 0.87
ERCC6LQ2NKX8 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ERCC6LQ2NKX8 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.48■□□□□ 0.87
ERCC6LQ2NKX8 PRORSD1P-202ENST00000563365 2154 ntBASIC20.48■□□□□ 0.87
ERCC6LQ2NKX8 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.48■□□□□ 0.87
ERCC6LQ2NKX8 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
ERCC6LQ2NKX8 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
ERCC6LQ2NKX8 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ERCC6LQ2NKX8 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
ERCC6LQ2NKX8 SLC7A5P2-201ENST00000553010 536 ntBASIC20.48■□□□□ 0.87
ERCC6LQ2NKX8 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.48■□□□□ 0.87
ERCC6LQ2NKX8 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.48■□□□□ 0.87
ERCC6LQ2NKX8 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
ERCC6LQ2NKX8 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20.48■□□□□ 0.87
ERCC6LQ2NKX8 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.48■□□□□ 0.87
ERCC6LQ2NKX8 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ERCC6LQ2NKX8 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ERCC6LQ2NKX8 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ERCC6LQ2NKX8 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ERCC6LQ2NKX8 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ERCC6LQ2NKX8 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
ERCC6LQ2NKX8 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ERCC6LQ2NKX8 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
ERCC6LQ2NKX8 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC20.47■□□□□ 0.87
ERCC6LQ2NKX8 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.47■□□□□ 0.87
ERCC6LQ2NKX8 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ERCC6LQ2NKX8 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ERCC6LQ2NKX8 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ERCC6LQ2NKX8 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
ERCC6LQ2NKX8 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ERCC6LQ2NKX8 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
ERCC6LQ2NKX8 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC20.47■□□□□ 0.87
ERCC6LQ2NKX8 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ERCC6LQ2NKX8 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ERCC6LQ2NKX8 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ERCC6LQ2NKX8 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ERCC6LQ2NKX8 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms