Protein–RNA interactions for Protein: Q12770

SCAP, Sterol regulatory element-binding protein cleavage-activating protein, humanhuman

Predictions only

Length 1,279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPQ12770 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.06■□□□□ 0.8
SCAPQ12770 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
SCAPQ12770 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.06■□□□□ 0.8
SCAPQ12770 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.06■□□□□ 0.8
SCAPQ12770 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.05■□□□□ 0.8
SCAPQ12770 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCAPQ12770 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
SCAPQ12770 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.05■□□□□ 0.8
SCAPQ12770 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCAPQ12770 AC116562.4-201ENST00000641316 2276 ntBASIC20.05■□□□□ 0.8
SCAPQ12770 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCAPQ12770 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.05■□□□□ 0.8
SCAPQ12770 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.05■□□□□ 0.8
SCAPQ12770 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.05■□□□□ 0.8
SCAPQ12770 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.05■□□□□ 0.8
SCAPQ12770 AC133561.5-201ENST00000635547 218 ntBASIC20.05■□□□□ 0.8
SCAPQ12770 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SCAPQ12770 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCAPQ12770 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCAPQ12770 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCAPQ12770 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCAPQ12770 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCAPQ12770 AC005332.7-201ENST00000614046 2005 ntBASIC20.05■□□□□ 0.8
SCAPQ12770 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCAPQ12770 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCAPQ12770 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCAPQ12770 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCAPQ12770 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.04■□□□□ 0.8
SCAPQ12770 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.04■□□□□ 0.8
SCAPQ12770 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCAPQ12770 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCAPQ12770 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SCAPQ12770 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.04■□□□□ 0.8
SCAPQ12770 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SCAPQ12770 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SCAPQ12770 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCAPQ12770 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SCAPQ12770 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCAPQ12770 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.04■□□□□ 0.8
SCAPQ12770 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.04■□□□□ 0.8
SCAPQ12770 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.04■□□□□ 0.8
SCAPQ12770 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCAPQ12770 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.04■□□□□ 0.8
SCAPQ12770 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.04■□□□□ 0.8
SCAPQ12770 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.04■□□□□ 0.8
SCAPQ12770 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
SCAPQ12770 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SCAPQ12770 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
SCAPQ12770 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SCAPQ12770 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SCAPQ12770 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.03■□□□□ 0.8
SCAPQ12770 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.03■□□□□ 0.8
SCAPQ12770 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
SCAPQ12770 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCAPQ12770 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.03■□□□□ 0.8
SCAPQ12770 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.03■□□□□ 0.8
SCAPQ12770 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SCAPQ12770 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.03■□□□□ 0.8
SCAPQ12770 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.03■□□□□ 0.8
SCAPQ12770 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SCAPQ12770 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SCAPQ12770 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.03■□□□□ 0.8
SCAPQ12770 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SCAPQ12770 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCAPQ12770 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.03■□□□□ 0.8
SCAPQ12770 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.03■□□□□ 0.8
SCAPQ12770 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.03■□□□□ 0.8
SCAPQ12770 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.03■□□□□ 0.8
SCAPQ12770 AF186192.3-201ENST00000583427 947 ntBASIC20.03■□□□□ 0.8
SCAPQ12770 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.03■□□□□ 0.8
SCAPQ12770 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCAPQ12770 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
SCAPQ12770 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCAPQ12770 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
SCAPQ12770 KRT17P2-201ENST00000300992 1314 ntBASIC20.02■□□□□ 0.8
SCAPQ12770 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
SCAPQ12770 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SCAPQ12770 AL135905.2-201ENST00000584934 1404 ntBASIC20.02■□□□□ 0.8
SCAPQ12770 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCAPQ12770 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.02■□□□□ 0.8
SCAPQ12770 SDHAP1-207ENST00000440850 2000 ntBASIC20.02■□□□□ 0.8
SCAPQ12770 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCAPQ12770 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SCAPQ12770 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCAPQ12770 KSR1P1-201ENST00000446298 240 ntBASIC20.02■□□□□ 0.8
SCAPQ12770 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SCAPQ12770 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SCAPQ12770 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SCAPQ12770 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.02■□□□□ 0.8
SCAPQ12770 AP002982.1-201ENST00000492365 877 ntBASIC20.02■□□□□ 0.8
SCAPQ12770 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.02■□□□□ 0.8
SCAPQ12770 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.02■□□□□ 0.8
SCAPQ12770 AL160286.2-201ENST00000567150 934 ntBASIC20.02■□□□□ 0.8
SCAPQ12770 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.02■□□□□ 0.8
SCAPQ12770 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCAPQ12770 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCAPQ12770 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCAPQ12770 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.02■□□□□ 0.8
SCAPQ12770 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCAPQ12770 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms