Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL20P78556 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL20P78556 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
CCL20P78556 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL20P78556 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.26■□□□□ 0.03
CCL20P78556 HCG11-201ENST00000411553 5696 ntBASIC15.26■□□□□ 0.03
CCL20P78556 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CCL20P78556 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCL20P78556 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL20P78556 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL20P78556 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC15.26■□□□□ 0.03
CCL20P78556 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCL20P78556 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL20P78556 IGHV3-19-201ENST00000521488 291 ntBASIC15.26■□□□□ 0.03
CCL20P78556 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC15.26■□□□□ 0.03
CCL20P78556 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCL20P78556 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCL20P78556 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL20P78556 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CCL20P78556 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL20P78556 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL20P78556 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC15.26■□□□□ 0.03
CCL20P78556 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCL20P78556 AC008764.6-201ENST00000595909 2069 ntBASIC15.26■□□□□ 0.03
CCL20P78556 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC15.26■□□□□ 0.03
CCL20P78556 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CCL20P78556 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCL20P78556 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
CCL20P78556 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CCL20P78556 PCDHA12-202ENST00000613593 2588 ntBASIC15.26■□□□□ 0.03
CCL20P78556 KRT8P17-201ENST00000453110 1448 ntBASIC15.26■□□□□ 0.03
CCL20P78556 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CCL20P78556 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCL20P78556 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL20P78556 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL20P78556 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL20P78556 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CCL20P78556 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.25■□□□□ 0.03
CCL20P78556 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL20P78556 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL20P78556 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCL20P78556 TNRC18P3-201ENST00000441896 2691 ntBASIC15.25■□□□□ 0.03
CCL20P78556 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCL20P78556 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CCL20P78556 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CCL20P78556 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL20P78556 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC15.25■□□□□ 0.03
CCL20P78556 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC15.25■□□□□ 0.03
CCL20P78556 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CCL20P78556 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL20P78556 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
CCL20P78556 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCL20P78556 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.25■□□□□ 0.03
CCL20P78556 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL20P78556 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL20P78556 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
CCL20P78556 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC15.25■□□□□ 0.03
CCL20P78556 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL20P78556 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CCL20P78556 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCL20P78556 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC15.25■□□□□ 0.03
CCL20P78556 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
CCL20P78556 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CCL20P78556 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCL20P78556 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCL20P78556 KRT16P6-202ENST00000425692 1426 ntBASIC15.25■□□□□ 0.03
CCL20P78556 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL20P78556 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL20P78556 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCL20P78556 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL20P78556 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL20P78556 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL20P78556 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL20P78556 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCL20P78556 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL20P78556 ESPNP-201ENST00000270691 2015 ntBASIC15.24■□□□□ 0.03
CCL20P78556 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCL20P78556 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL20P78556 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL20P78556 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.24■□□□□ 0.03
CCL20P78556 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL20P78556 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCL20P78556 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CCL20P78556 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC15.24■□□□□ 0.03
CCL20P78556 NAA20-201ENST00000310450 920 ntTSL 2 BASIC15.24■□□□□ 0.03
CCL20P78556 AC007322.3-201ENST00000426526 701 ntBASIC15.24■□□□□ 0.03
CCL20P78556 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCL20P78556 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CCL20P78556 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CCL20P78556 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.24■□□□□ 0.03
CCL20P78556 SF1-220ENST00000626028 704 ntTSL 2 BASIC15.24■□□□□ 0.03
CCL20P78556 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
CCL20P78556 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
CCL20P78556 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC15.24■□□□□ 0.03
CCL20P78556 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC15.24■□□□□ 0.03
CCL20P78556 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC15.24■□□□□ 0.03
CCL20P78556 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
CCL20P78556 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL20P78556 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CCL20P78556 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms