Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 AC069148.1-201ENST00000608741 768 ntBASIC18.44■□□□□ 0.54
GABREP78334 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
GABREP78334 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.44■□□□□ 0.54
GABREP78334 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.44■□□□□ 0.54
GABREP78334 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.44■□□□□ 0.54
GABREP78334 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
GABREP78334 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.44■□□□□ 0.54
GABREP78334 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
GABREP78334 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
GABREP78334 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
GABREP78334 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
GABREP78334 KRT8P8-201ENST00000434750 1448 ntBASIC18.43■□□□□ 0.54
GABREP78334 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
GABREP78334 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.43■□□□□ 0.54
GABREP78334 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.43■□□□□ 0.54
GABREP78334 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.43■□□□□ 0.54
GABREP78334 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
GABREP78334 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
GABREP78334 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.43■□□□□ 0.54
GABREP78334 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.43■□□□□ 0.54
GABREP78334 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.43■□□□□ 0.54
GABREP78334 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
GABREP78334 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.43■□□□□ 0.54
GABREP78334 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
GABREP78334 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
GABREP78334 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
GABREP78334 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
GABREP78334 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
GABREP78334 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.43■□□□□ 0.54
GABREP78334 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
GABREP78334 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
GABREP78334 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
GABREP78334 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.42■□□□□ 0.54
GABREP78334 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
GABREP78334 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.42■□□□□ 0.54
GABREP78334 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GABREP78334 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GABREP78334 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
GABREP78334 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GABREP78334 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GABREP78334 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.42■□□□□ 0.54
GABREP78334 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.42■□□□□ 0.54
GABREP78334 CA15P1-201ENST00000481698 905 ntBASIC18.42■□□□□ 0.54
GABREP78334 CLEC4GP1-201ENST00000596555 870 ntBASIC18.42■□□□□ 0.54
GABREP78334 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
GABREP78334 AC008622.2-201ENST00000617006 1229 ntBASIC18.42■□□□□ 0.54
GABREP78334 AC116407.4-201ENST00000623319 1061 ntBASIC18.42■□□□□ 0.54
GABREP78334 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.42■□□□□ 0.54
GABREP78334 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.42■□□□□ 0.54
GABREP78334 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.42■□□□□ 0.54
GABREP78334 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GABREP78334 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
GABREP78334 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.42■□□□□ 0.54
GABREP78334 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.42■□□□□ 0.54
GABREP78334 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.42■□□□□ 0.54
GABREP78334 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
GABREP78334 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.41■□□□□ 0.54
GABREP78334 AC006128.1-201ENST00000624704 1661 ntBASIC18.41■□□□□ 0.54
GABREP78334 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GABREP78334 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GABREP78334 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
GABREP78334 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GABREP78334 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.41■□□□□ 0.54
GABREP78334 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.41■□□□□ 0.54
GABREP78334 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GABREP78334 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GABREP78334 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
GABREP78334 VENTXP5-201ENST00000523979 775 ntBASIC18.41■□□□□ 0.54
GABREP78334 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.41■□□□□ 0.54
GABREP78334 AL160286.2-201ENST00000567150 934 ntBASIC18.41■□□□□ 0.54
GABREP78334 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.41■□□□□ 0.54
GABREP78334 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GABREP78334 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
GABREP78334 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
GABREP78334 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
GABREP78334 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GABREP78334 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
GABREP78334 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.4■□□□□ 0.54
GABREP78334 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GABREP78334 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GABREP78334 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.4■□□□□ 0.54
GABREP78334 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
GABREP78334 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.4■□□□□ 0.54
GABREP78334 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.4■□□□□ 0.54
GABREP78334 KRT18P38-201ENST00000449496 1282 ntBASIC18.4■□□□□ 0.54
GABREP78334 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.4■□□□□ 0.54
GABREP78334 PRSS44-201ENST00000515154 1146 ntBASIC18.4■□□□□ 0.54
GABREP78334 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.4■□□□□ 0.54
GABREP78334 AP003041.3-201ENST00000527151 707 ntBASIC18.4■□□□□ 0.54
GABREP78334 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.4■□□□□ 0.54
GABREP78334 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.4■□□□□ 0.54
GABREP78334 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GABREP78334 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GABREP78334 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.4■□□□□ 0.54
GABREP78334 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GABREP78334 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GABREP78334 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GABREP78334 AC007225.1-201ENST00000566331 1836 ntBASIC18.39■□□□□ 0.54
GABREP78334 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
GABREP78334 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms