Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
PER3P56645 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PER3P56645 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
PER3P56645 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PER3P56645 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PER3P56645 AC098818.2-201ENST00000564925 2320 ntBASIC17.92■□□□□ 0.46
PER3P56645 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.91■□□□□ 0.46
PER3P56645 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
PER3P56645 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PER3P56645 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PER3P56645 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
PER3P56645 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
PER3P56645 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PER3P56645 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PER3P56645 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PER3P56645 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PER3P56645 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PER3P56645 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PER3P56645 GABARAPL3-202ENST00000624044 1851 ntBASIC17.91■□□□□ 0.46
PER3P56645 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PER3P56645 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PER3P56645 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
PER3P56645 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
PER3P56645 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PER3P56645 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.91■□□□□ 0.46
PER3P56645 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.91■□□□□ 0.46
PER3P56645 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.91■□□□□ 0.46
PER3P56645 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PER3P56645 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.91■□□□□ 0.46
PER3P56645 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.91■□□□□ 0.46
PER3P56645 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.91■□□□□ 0.46
PER3P56645 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PER3P56645 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PER3P56645 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.91■□□□□ 0.46
PER3P56645 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PER3P56645 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PER3P56645 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PER3P56645 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PER3P56645 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PER3P56645 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
PER3P56645 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.9■□□□□ 0.46
PER3P56645 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PER3P56645 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PER3P56645 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PER3P56645 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PER3P56645 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PER3P56645 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.9■□□□□ 0.46
PER3P56645 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PER3P56645 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.9■□□□□ 0.46
PER3P56645 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PER3P56645 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.9■□□□□ 0.46
PER3P56645 MIR1238-201ENST00000408483 83 ntBASIC17.9■□□□□ 0.46
PER3P56645 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.9■□□□□ 0.46
PER3P56645 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.9■□□□□ 0.46
PER3P56645 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.9■□□□□ 0.46
PER3P56645 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.9■□□□□ 0.46
PER3P56645 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.9■□□□□ 0.46
PER3P56645 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
PER3P56645 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PER3P56645 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PER3P56645 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.9■□□□□ 0.46
PER3P56645 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
PER3P56645 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PER3P56645 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PER3P56645 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PER3P56645 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.89■□□□□ 0.45
PER3P56645 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PER3P56645 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PER3P56645 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PER3P56645 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PER3P56645 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PER3P56645 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.89■□□□□ 0.45
PER3P56645 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.89■□□□□ 0.45
PER3P56645 AC023632.3-201ENST00000521633 145 ntBASIC17.89■□□□□ 0.45
PER3P56645 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.89■□□□□ 0.45
PER3P56645 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.89■□□□□ 0.45
PER3P56645 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.89■□□□□ 0.45
PER3P56645 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PER3P56645 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
PER3P56645 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PER3P56645 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PER3P56645 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PER3P56645 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
PER3P56645 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PER3P56645 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PER3P56645 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
PER3P56645 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
PER3P56645 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PER3P56645 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PER3P56645 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PER3P56645 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.88■□□□□ 0.45
PER3P56645 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PER3P56645 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PER3P56645 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PER3P56645 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.88■□□□□ 0.45
PER3P56645 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.88■□□□□ 0.45
PER3P56645 HLA-G-202ENST00000376815 851 ntBASIC17.88■□□□□ 0.45
PER3P56645 HLA-G-203ENST00000376818 1127 ntBASIC17.88■□□□□ 0.45
PER3P56645 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PER3P56645 AP000525.1-201ENST00000608286 694 ntBASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms