Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PPP3CBP16298 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.38■□□□□ 0.37
PPP3CBP16298 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PPP3CBP16298 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.38■□□□□ 0.37
PPP3CBP16298 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PPP3CBP16298 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PPP3CBP16298 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PPP3CBP16298 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PPP3CBP16298 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PPP3CBP16298 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PPP3CBP16298 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PPP3CBP16298 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PPP3CBP16298 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PPP3CBP16298 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PPP3CBP16298 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PPP3CBP16298 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.37■□□□□ 0.37
PPP3CBP16298 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.37■□□□□ 0.37
PPP3CBP16298 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.37■□□□□ 0.37
PPP3CBP16298 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PPP3CBP16298 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
PPP3CBP16298 AL162377.1-201ENST00000618844 1793 ntBASIC17.37■□□□□ 0.37
PPP3CBP16298 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PPP3CBP16298 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PPP3CBP16298 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.37■□□□□ 0.37
PPP3CBP16298 AC138932.1-201ENST00000534164 6830 ntBASIC17.37■□□□□ 0.37
PPP3CBP16298 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PPP3CBP16298 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PPP3CBP16298 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PPP3CBP16298 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
PPP3CBP16298 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.36■□□□□ 0.37
PPP3CBP16298 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PPP3CBP16298 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.36■□□□□ 0.37
PPP3CBP16298 AC116562.4-201ENST00000641316 2276 ntBASIC17.36■□□□□ 0.37
PPP3CBP16298 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.36■□□□□ 0.37
PPP3CBP16298 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.36■□□□□ 0.37
PPP3CBP16298 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PPP3CBP16298 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PPP3CBP16298 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
PPP3CBP16298 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.36■□□□□ 0.37
PPP3CBP16298 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.36■□□□□ 0.37
PPP3CBP16298 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.36■□□□□ 0.37
PPP3CBP16298 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.36■□□□□ 0.37
PPP3CBP16298 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.36■□□□□ 0.37
PPP3CBP16298 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.36■□□□□ 0.37
PPP3CBP16298 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
PPP3CBP16298 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PPP3CBP16298 AC113410.3-201ENST00000623366 203 ntBASIC17.36■□□□□ 0.37
PPP3CBP16298 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PPP3CBP16298 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PPP3CBP16298 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.36■□□□□ 0.37
PPP3CBP16298 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PPP3CBP16298 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PPP3CBP16298 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PPP3CBP16298 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
PPP3CBP16298 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PPP3CBP16298 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.35■□□□□ 0.37
PPP3CBP16298 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.35■□□□□ 0.37
PPP3CBP16298 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PPP3CBP16298 AC124283.5-201ENST00000624661 1809 ntBASIC17.35■□□□□ 0.37
PPP3CBP16298 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PPP3CBP16298 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PPP3CBP16298 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PPP3CBP16298 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PPP3CBP16298 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PPP3CBP16298 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.35■□□□□ 0.37
PPP3CBP16298 AP000974.1-201ENST00000623909 2387 ntBASIC17.35■□□□□ 0.37
PPP3CBP16298 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PPP3CBP16298 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PPP3CBP16298 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
PPP3CBP16298 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.35■□□□□ 0.37
PPP3CBP16298 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PPP3CBP16298 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PPP3CBP16298 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.35■□□□□ 0.37
PPP3CBP16298 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.35■□□□□ 0.37
PPP3CBP16298 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PPP3CBP16298 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.35■□□□□ 0.37
PPP3CBP16298 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.35■□□□□ 0.37
PPP3CBP16298 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.35■□□□□ 0.37
PPP3CBP16298 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.35■□□□□ 0.37
PPP3CBP16298 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PPP3CBP16298 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PPP3CBP16298 HTR7P1-201ENST00000538670 1336 ntBASIC17.35■□□□□ 0.37
PPP3CBP16298 KRT16P6-202ENST00000425692 1426 ntBASIC17.35■□□□□ 0.37
PPP3CBP16298 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.35■□□□□ 0.37
PPP3CBP16298 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PPP3CBP16298 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PPP3CBP16298 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PPP3CBP16298 FP700111.2-201ENST00000619190 1892 ntBASIC17.35■□□□□ 0.37
PPP3CBP16298 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PPP3CBP16298 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PPP3CBP16298 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PPP3CBP16298 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.35■□□□□ 0.37
PPP3CBP16298 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
PPP3CBP16298 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PPP3CBP16298 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PPP3CBP16298 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PPP3CBP16298 AC004408.2-201ENST00000623613 2777 ntBASIC17.34■□□□□ 0.37
PPP3CBP16298 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PPP3CBP16298 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PPP3CBP16298 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms