Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CAPN1P07384 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CAPN1P07384 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.05■□□□□ 0.64
CAPN1P07384 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CAPN1P07384 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CAPN1P07384 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CAPN1P07384 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CAPN1P07384 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CAPN1P07384 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.05■□□□□ 0.64
CAPN1P07384 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.05■□□□□ 0.64
CAPN1P07384 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
CAPN1P07384 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CAPN1P07384 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CAPN1P07384 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.05■□□□□ 0.64
CAPN1P07384 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CAPN1P07384 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CAPN1P07384 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.05■□□□□ 0.64
CAPN1P07384 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.05■□□□□ 0.64
CAPN1P07384 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.05■□□□□ 0.64
CAPN1P07384 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.05■□□□□ 0.64
CAPN1P07384 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CAPN1P07384 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CAPN1P07384 BX323043.1-201ENST00000641006 1765 ntBASIC19.05■□□□□ 0.64
CAPN1P07384 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CAPN1P07384 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.05■□□□□ 0.64
CAPN1P07384 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
CAPN1P07384 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.05■□□□□ 0.64
CAPN1P07384 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CAPN1P07384 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CAPN1P07384 Z82202.1-201ENST00000623446 1880 ntBASIC19.05■□□□□ 0.64
CAPN1P07384 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CAPN1P07384 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CAPN1P07384 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
CAPN1P07384 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CAPN1P07384 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CAPN1P07384 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.04■□□□□ 0.64
CAPN1P07384 AC018553.1-201ENST00000616682 1458 ntBASIC19.04■□□□□ 0.64
CAPN1P07384 AP000974.1-201ENST00000623909 2387 ntBASIC19.04■□□□□ 0.64
CAPN1P07384 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CAPN1P07384 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
CAPN1P07384 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CAPN1P07384 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CAPN1P07384 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CAPN1P07384 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.04■□□□□ 0.64
CAPN1P07384 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
CAPN1P07384 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CAPN1P07384 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.04■□□□□ 0.64
CAPN1P07384 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CAPN1P07384 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CAPN1P07384 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.04■□□□□ 0.64
CAPN1P07384 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CAPN1P07384 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.04■□□□□ 0.64
CAPN1P07384 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CAPN1P07384 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.04■□□□□ 0.64
CAPN1P07384 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CAPN1P07384 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CAPN1P07384 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.04■□□□□ 0.64
CAPN1P07384 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CAPN1P07384 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CAPN1P07384 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CAPN1P07384 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CAPN1P07384 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.03■□□□□ 0.64
CAPN1P07384 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CAPN1P07384 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CAPN1P07384 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.03■□□□□ 0.64
CAPN1P07384 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CAPN1P07384 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CAPN1P07384 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
CAPN1P07384 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.03■□□□□ 0.64
CAPN1P07384 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.03■□□□□ 0.64
CAPN1P07384 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CAPN1P07384 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CAPN1P07384 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.03■□□□□ 0.64
CAPN1P07384 Z99916.2-201ENST00000604037 246 ntBASIC19.03■□□□□ 0.64
CAPN1P07384 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CAPN1P07384 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.03■□□□□ 0.64
CAPN1P07384 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CAPN1P07384 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.03■□□□□ 0.64
CAPN1P07384 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
CAPN1P07384 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CAPN1P07384 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CAPN1P07384 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CAPN1P07384 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CAPN1P07384 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CAPN1P07384 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CAPN1P07384 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CAPN1P07384 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CAPN1P07384 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CAPN1P07384 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.02■□□□□ 0.64
CAPN1P07384 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CAPN1P07384 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CAPN1P07384 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CAPN1P07384 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CAPN1P07384 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CAPN1P07384 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CAPN1P07384 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CAPN1P07384 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.02■□□□□ 0.64
CAPN1P07384 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.02■□□□□ 0.64
CAPN1P07384 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
CAPN1P07384 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms