Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
PDGFAP04085 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.1■□□□□ 0.49
PDGFAP04085 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDGFAP04085 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDGFAP04085 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDGFAP04085 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
PDGFAP04085 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDGFAP04085 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDGFAP04085 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.1■□□□□ 0.49
PDGFAP04085 CRYGFP-201ENST00000418459 633 ntBASIC18.1■□□□□ 0.49
PDGFAP04085 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.1■□□□□ 0.49
PDGFAP04085 AC004980.1-204ENST00000429707 299 ntBASIC18.1■□□□□ 0.49
PDGFAP04085 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.1■□□□□ 0.49
PDGFAP04085 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
PDGFAP04085 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDGFAP04085 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.1■□□□□ 0.49
PDGFAP04085 FAM87A-204ENST00000613235 858 ntBASIC18.1■□□□□ 0.49
PDGFAP04085 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.1■□□□□ 0.49
PDGFAP04085 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PDGFAP04085 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDGFAP04085 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDGFAP04085 LINC01006-201ENST00000333319 2292 ntBASIC18.1■□□□□ 0.49
PDGFAP04085 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
PDGFAP04085 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDGFAP04085 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFAP04085 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFAP04085 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
PDGFAP04085 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.09■□□□□ 0.49
PDGFAP04085 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFAP04085 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFAP04085 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.09■□□□□ 0.49
PDGFAP04085 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFAP04085 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFAP04085 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFAP04085 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
PDGFAP04085 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFAP04085 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.09■□□□□ 0.49
PDGFAP04085 AC097488.1-201ENST00000507834 756 ntBASIC18.09■□□□□ 0.49
PDGFAP04085 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.09■□□□□ 0.49
PDGFAP04085 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.09■□□□□ 0.49
PDGFAP04085 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
PDGFAP04085 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.09■□□□□ 0.49
PDGFAP04085 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.09■□□□□ 0.49
PDGFAP04085 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFAP04085 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFAP04085 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFAP04085 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFAP04085 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
PDGFAP04085 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFAP04085 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFAP04085 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDGFAP04085 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDGFAP04085 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDGFAP04085 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PDGFAP04085 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
PDGFAP04085 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDGFAP04085 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
PDGFAP04085 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDGFAP04085 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PDGFAP04085 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDGFAP04085 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDGFAP04085 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDGFAP04085 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDGFAP04085 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.08■□□□□ 0.48
PDGFAP04085 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDGFAP04085 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PDGFAP04085 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.08■□□□□ 0.48
PDGFAP04085 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.08■□□□□ 0.48
PDGFAP04085 DGCR10-201ENST00000609839 495 ntBASIC18.08■□□□□ 0.48
PDGFAP04085 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.08■□□□□ 0.48
PDGFAP04085 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDGFAP04085 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDGFAP04085 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDGFAP04085 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDGFAP04085 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PDGFAP04085 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.08■□□□□ 0.48
PDGFAP04085 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.48
PDGFAP04085 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDGFAP04085 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDGFAP04085 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
PDGFAP04085 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
PDGFAP04085 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDGFAP04085 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
PDGFAP04085 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
PDGFAP04085 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.07■□□□□ 0.48
PDGFAP04085 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PDGFAP04085 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDGFAP04085 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.07■□□□□ 0.48
PDGFAP04085 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
PDGFAP04085 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PDGFAP04085 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.07■□□□□ 0.48
PDGFAP04085 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.07■□□□□ 0.48
PDGFAP04085 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PDGFAP04085 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
PDGFAP04085 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.07■□□□□ 0.48
PDGFAP04085 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.07■□□□□ 0.48
PDGFAP04085 PLK5-205ENST00000642079 1969 ntBASIC18.07■□□□□ 0.48
PDGFAP04085 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
PDGFAP04085 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDGFAP04085 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms