Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
MT-ND1P03886 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MT-ND1P03886 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
MT-ND1P03886 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.27■□□□□ 0.52
MT-ND1P03886 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
MT-ND1P03886 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
MT-ND1P03886 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MT-ND1P03886 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MT-ND1P03886 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MT-ND1P03886 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
MT-ND1P03886 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MT-ND1P03886 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
MT-ND1P03886 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
MT-ND1P03886 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
MT-ND1P03886 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
MT-ND1P03886 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
MT-ND1P03886 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.27■□□□□ 0.51
MT-ND1P03886 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
MT-ND1P03886 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
MT-ND1P03886 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
MT-ND1P03886 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.26■□□□□ 0.51
MT-ND1P03886 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MT-ND1P03886 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.26■□□□□ 0.51
MT-ND1P03886 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MT-ND1P03886 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MT-ND1P03886 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MT-ND1P03886 TEX21P-204ENST00000641479 1693 ntBASIC18.26■□□□□ 0.51
MT-ND1P03886 AC026271.2-201ENST00000428091 497 ntBASIC18.26■□□□□ 0.51
MT-ND1P03886 AC100791.3-201ENST00000617619 330 ntBASIC18.26■□□□□ 0.51
MT-ND1P03886 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
MT-ND1P03886 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.26■□□□□ 0.51
MT-ND1P03886 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
MT-ND1P03886 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MT-ND1P03886 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MT-ND1P03886 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MT-ND1P03886 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.26■□□□□ 0.51
MT-ND1P03886 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MT-ND1P03886 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.26■□□□□ 0.51
MT-ND1P03886 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MT-ND1P03886 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
MT-ND1P03886 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.26■□□□□ 0.51
MT-ND1P03886 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MT-ND1P03886 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MT-ND1P03886 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MT-ND1P03886 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MT-ND1P03886 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
MT-ND1P03886 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.25■□□□□ 0.51
MT-ND1P03886 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
MT-ND1P03886 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MT-ND1P03886 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
MT-ND1P03886 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.25■□□□□ 0.51
MT-ND1P03886 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.25■□□□□ 0.51
MT-ND1P03886 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.25■□□□□ 0.51
MT-ND1P03886 RARRES2P4-201ENST00000514074 484 ntBASIC18.25■□□□□ 0.51
MT-ND1P03886 DUX4L16-201ENST00000555130 1264 ntBASIC18.25■□□□□ 0.51
MT-ND1P03886 RARRES2P6-201ENST00000567333 442 ntBASIC18.25■□□□□ 0.51
MT-ND1P03886 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.25■□□□□ 0.51
MT-ND1P03886 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
MT-ND1P03886 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MT-ND1P03886 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MT-ND1P03886 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MT-ND1P03886 LTB4R2-202ENST00000528054 3092 ntBASIC18.25■□□□□ 0.51
MT-ND1P03886 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MT-ND1P03886 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MT-ND1P03886 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.25■□□□□ 0.51
MT-ND1P03886 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MT-ND1P03886 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MT-ND1P03886 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MT-ND1P03886 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MT-ND1P03886 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
MT-ND1P03886 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
MT-ND1P03886 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.25■□□□□ 0.51
MT-ND1P03886 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
MT-ND1P03886 AL390961.4-201ENST00000623958 2535 ntBASIC18.24■□□□□ 0.51
MT-ND1P03886 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MT-ND1P03886 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MT-ND1P03886 AC068338.2-201ENST00000563278 1430 ntBASIC18.24■□□□□ 0.51
MT-ND1P03886 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
MT-ND1P03886 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MT-ND1P03886 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.24■□□□□ 0.51
MT-ND1P03886 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MT-ND1P03886 MCRIP2P1-201ENST00000394346 511 ntBASIC18.24■□□□□ 0.51
MT-ND1P03886 AC006015.1-201ENST00000429970 570 ntBASIC18.24■□□□□ 0.51
MT-ND1P03886 CNN2P6-201ENST00000439038 900 ntBASIC18.24■□□□□ 0.51
MT-ND1P03886 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.24■□□□□ 0.51
MT-ND1P03886 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MT-ND1P03886 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
MT-ND1P03886 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.24■□□□□ 0.51
MT-ND1P03886 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
MT-ND1P03886 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.24■□□□□ 0.51
MT-ND1P03886 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
MT-ND1P03886 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
MT-ND1P03886 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MT-ND1P03886 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.24■□□□□ 0.51
MT-ND1P03886 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MT-ND1P03886 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MT-ND1P03886 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
MT-ND1P03886 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
MT-ND1P03886 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MT-ND1P03886 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms