Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
PTCD1O75127 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
PTCD1O75127 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC24.9■■□□□ 1.58
PTCD1O75127 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC24.9■■□□□ 1.58
PTCD1O75127 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC24.9■■□□□ 1.58
PTCD1O75127 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
PTCD1O75127 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
PTCD1O75127 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC24.9■■□□□ 1.58
PTCD1O75127 KRT18P38-201ENST00000449496 1282 ntBASIC24.9■■□□□ 1.58
PTCD1O75127 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
PTCD1O75127 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC24.9■■□□□ 1.58
PTCD1O75127 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC24.9■■□□□ 1.58
PTCD1O75127 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC24.9■■□□□ 1.58
PTCD1O75127 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC24.9■■□□□ 1.58
PTCD1O75127 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
PTCD1O75127 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC24.9■■□□□ 1.58
PTCD1O75127 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC24.9■■□□□ 1.58
PTCD1O75127 ETFA-216ENST00000560726 942 ntTSL 3 BASIC24.9■■□□□ 1.58
PTCD1O75127 AL121956.5-201ENST00000625261 221 ntBASIC24.9■■□□□ 1.58
PTCD1O75127 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PTCD1O75127 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC24.9■■□□□ 1.58
PTCD1O75127 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
PTCD1O75127 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
PTCD1O75127 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
PTCD1O75127 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
PTCD1O75127 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
PTCD1O75127 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC24.89■■□□□ 1.58
PTCD1O75127 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
PTCD1O75127 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
PTCD1O75127 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC24.89■■□□□ 1.58
PTCD1O75127 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC24.89■■□□□ 1.58
PTCD1O75127 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC24.89■■□□□ 1.58
PTCD1O75127 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
PTCD1O75127 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC24.89■■□□□ 1.58
PTCD1O75127 HOMER2P1-201ENST00000455653 964 ntBASIC24.89■■□□□ 1.58
PTCD1O75127 AL671277.2-201ENST00000458060 996 ntBASIC24.89■■□□□ 1.58
PTCD1O75127 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC24.89■■□□□ 1.58
PTCD1O75127 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
PTCD1O75127 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
PTCD1O75127 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
PTCD1O75127 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC24.89■■□□□ 1.57
PTCD1O75127 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
PTCD1O75127 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PTCD1O75127 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC24.88■■□□□ 1.57
PTCD1O75127 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
PTCD1O75127 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PTCD1O75127 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
PTCD1O75127 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC24.88■■□□□ 1.57
PTCD1O75127 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
PTCD1O75127 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
PTCD1O75127 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
PTCD1O75127 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PTCD1O75127 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
PTCD1O75127 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC24.88■■□□□ 1.57
PTCD1O75127 TOLLIP-AS1-201ENST00000530897 939 ntBASIC24.88■■□□□ 1.57
PTCD1O75127 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC24.88■■□□□ 1.57
PTCD1O75127 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC24.88■■□□□ 1.57
PTCD1O75127 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC24.88■■□□□ 1.57
PTCD1O75127 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
PTCD1O75127 IER3-202ENST00000376377 1350 ntBASIC24.88■■□□□ 1.57
PTCD1O75127 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC24.88■■□□□ 1.57
PTCD1O75127 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
PTCD1O75127 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC24.88■■□□□ 1.57
PTCD1O75127 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PTCD1O75127 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC24.87■■□□□ 1.57
PTCD1O75127 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC24.87■■□□□ 1.57
PTCD1O75127 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
PTCD1O75127 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PTCD1O75127 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PTCD1O75127 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
PTCD1O75127 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PTCD1O75127 Telomerase-vert.1-201ENST00000363312 438 ntBASIC24.87■■□□□ 1.57
PTCD1O75127 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
PTCD1O75127 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PTCD1O75127 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
PTCD1O75127 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
PTCD1O75127 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
PTCD1O75127 PRSS44-201ENST00000515154 1146 ntBASIC24.87■■□□□ 1.57
PTCD1O75127 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC24.87■■□□□ 1.57
PTCD1O75127 AL121894.2-201ENST00000602977 491 ntBASIC24.87■■□□□ 1.57
PTCD1O75127 AC093458.2-201ENST00000623150 629 ntBASIC24.87■■□□□ 1.57
PTCD1O75127 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
PTCD1O75127 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC24.87■■□□□ 1.57
PTCD1O75127 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PTCD1O75127 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
PTCD1O75127 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC24.87■■□□□ 1.57
PTCD1O75127 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
PTCD1O75127 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PTCD1O75127 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
PTCD1O75127 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PTCD1O75127 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC24.86■■□□□ 1.57
PTCD1O75127 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
PTCD1O75127 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PTCD1O75127 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC24.86■■□□□ 1.57
PTCD1O75127 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC24.86■■□□□ 1.57
PTCD1O75127 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC24.86■■□□□ 1.57
PTCD1O75127 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
PTCD1O75127 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC24.86■■□□□ 1.57
PTCD1O75127 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PTCD1O75127 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms