Protein–RNA interactions for Protein: O60671

RAD1, Cell cycle checkpoint protein RAD1, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD1O60671 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RAD1O60671 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAD1O60671 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.39■□□□□ 0.53
RAD1O60671 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.39■□□□□ 0.53
RAD1O60671 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.39■□□□□ 0.53
RAD1O60671 LINC01238-205ENST00000567549 1107 ntBASIC18.39■□□□□ 0.53
RAD1O60671 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.39■□□□□ 0.53
RAD1O60671 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.39■□□□□ 0.53
RAD1O60671 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.39■□□□□ 0.53
RAD1O60671 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.39■□□□□ 0.53
RAD1O60671 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.39■□□□□ 0.53
RAD1O60671 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAD1O60671 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RAD1O60671 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RAD1O60671 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAD1O60671 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAD1O60671 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RAD1O60671 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAD1O60671 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAD1O60671 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RAD1O60671 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAD1O60671 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.38■□□□□ 0.53
RAD1O60671 CCR12P-201ENST00000446203 998 ntBASIC18.38■□□□□ 0.53
RAD1O60671 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.38■□□□□ 0.53
RAD1O60671 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAD1O60671 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAD1O60671 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAD1O60671 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RAD1O60671 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RAD1O60671 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RAD1O60671 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RAD1O60671 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.38■□□□□ 0.53
RAD1O60671 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAD1O60671 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.38■□□□□ 0.53
RAD1O60671 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAD1O60671 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RAD1O60671 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAD1O60671 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAD1O60671 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.37■□□□□ 0.53
RAD1O60671 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAD1O60671 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAD1O60671 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAD1O60671 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAD1O60671 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAD1O60671 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
RAD1O60671 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.37■□□□□ 0.53
RAD1O60671 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
RAD1O60671 AC022616.7-201ENST00000525383 220 ntBASIC18.37■□□□□ 0.53
RAD1O60671 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.37■□□□□ 0.53
RAD1O60671 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.37■□□□□ 0.53
RAD1O60671 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.37■□□□□ 0.53
RAD1O60671 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
RAD1O60671 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAD1O60671 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.37■□□□□ 0.53
RAD1O60671 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RAD1O60671 AC096733.2-201ENST00000609937 1394 ntBASIC18.37■□□□□ 0.53
RAD1O60671 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAD1O60671 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.37■□□□□ 0.53
RAD1O60671 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RAD1O60671 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.37■□□□□ 0.53
RAD1O60671 TMEM179-206ENST00000616017 1645 ntBASIC18.37■□□□□ 0.53
RAD1O60671 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAD1O60671 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAD1O60671 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAD1O60671 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.36■□□□□ 0.53
RAD1O60671 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAD1O60671 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAD1O60671 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
RAD1O60671 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAD1O60671 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAD1O60671 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAD1O60671 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAD1O60671 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAD1O60671 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
RAD1O60671 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RAD1O60671 AC117947.1-201ENST00000427448 529 ntBASIC18.36■□□□□ 0.53
RAD1O60671 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAD1O60671 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAD1O60671 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RAD1O60671 LINC01521-201ENST00000504184 1943 ntBASIC18.36■□□□□ 0.53
RAD1O60671 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.36■□□□□ 0.53
RAD1O60671 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.36■□□□□ 0.53
RAD1O60671 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.36■□□□□ 0.53
RAD1O60671 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.36■□□□□ 0.53
RAD1O60671 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
RAD1O60671 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAD1O60671 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAD1O60671 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
RAD1O60671 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
RAD1O60671 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAD1O60671 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAD1O60671 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAD1O60671 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAD1O60671 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAD1O60671 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAD1O60671 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.35■□□□□ 0.53
RAD1O60671 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.35■□□□□ 0.53
RAD1O60671 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
RAD1O60671 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.35■□□□□ 0.53
RAD1O60671 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms