Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 GPX1P1-201ENST00000388829 606 ntBASIC18.38■□□□□ 0.53
CLOCKO15516 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.38■□□□□ 0.53
CLOCKO15516 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.38■□□□□ 0.53
CLOCKO15516 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.38■□□□□ 0.53
CLOCKO15516 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.38■□□□□ 0.53
CLOCKO15516 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLOCKO15516 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CLOCKO15516 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLOCKO15516 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.38■□□□□ 0.53
CLOCKO15516 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CLOCKO15516 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLOCKO15516 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLOCKO15516 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLOCKO15516 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.38■□□□□ 0.53
CLOCKO15516 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLOCKO15516 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
CLOCKO15516 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLOCKO15516 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLOCKO15516 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLOCKO15516 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLOCKO15516 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLOCKO15516 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLOCKO15516 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLOCKO15516 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLOCKO15516 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLOCKO15516 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLOCKO15516 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLOCKO15516 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.38■□□□□ 0.53
CLOCKO15516 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CLOCKO15516 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLOCKO15516 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLOCKO15516 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLOCKO15516 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLOCKO15516 AC018470.1-201ENST00000624790 3129 ntBASIC18.37■□□□□ 0.53
CLOCKO15516 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLOCKO15516 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLOCKO15516 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CLOCKO15516 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLOCKO15516 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.37■□□□□ 0.53
CLOCKO15516 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLOCKO15516 CDV3P1-201ENST00000471403 739 ntBASIC18.37■□□□□ 0.53
CLOCKO15516 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLOCKO15516 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.37■□□□□ 0.53
CLOCKO15516 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.37■□□□□ 0.53
CLOCKO15516 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.37■□□□□ 0.53
CLOCKO15516 AC005181.1-201ENST00000604782 1256 ntBASIC18.37■□□□□ 0.53
CLOCKO15516 AC104581.1-202ENST00000635932 2618 ntBASIC18.37■□□□□ 0.53
CLOCKO15516 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CLOCKO15516 KRT8P17-201ENST00000453110 1448 ntBASIC18.37■□□□□ 0.53
CLOCKO15516 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLOCKO15516 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLOCKO15516 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLOCKO15516 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLOCKO15516 PTBP1P-201ENST00000554374 1601 ntBASIC18.37■□□□□ 0.53
CLOCKO15516 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CLOCKO15516 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLOCKO15516 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.37■□□□□ 0.53
CLOCKO15516 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
CLOCKO15516 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLOCKO15516 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLOCKO15516 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLOCKO15516 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CLOCKO15516 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.37■□□□□ 0.53
CLOCKO15516 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CLOCKO15516 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLOCKO15516 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLOCKO15516 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLOCKO15516 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLOCKO15516 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLOCKO15516 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLOCKO15516 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
CLOCKO15516 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.36■□□□□ 0.53
CLOCKO15516 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLOCKO15516 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLOCKO15516 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLOCKO15516 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CLOCKO15516 KRT16P6-202ENST00000425692 1426 ntBASIC18.36■□□□□ 0.53
CLOCKO15516 NCF1B-203ENST00000435988 1254 ntBASIC18.36■□□□□ 0.53
CLOCKO15516 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.36■□□□□ 0.53
CLOCKO15516 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
CLOCKO15516 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.36■□□□□ 0.53
CLOCKO15516 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.36■□□□□ 0.53
CLOCKO15516 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLOCKO15516 DUX4L16-201ENST00000555130 1264 ntBASIC18.36■□□□□ 0.53
CLOCKO15516 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.36■□□□□ 0.53
CLOCKO15516 AC087633.2-202ENST00000565166 1439 ntBASIC18.36■□□□□ 0.53
CLOCKO15516 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.36■□□□□ 0.53
CLOCKO15516 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.36■□□□□ 0.53
CLOCKO15516 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.36■□□□□ 0.53
CLOCKO15516 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLOCKO15516 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.35■□□□□ 0.53
CLOCKO15516 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.35■□□□□ 0.53
CLOCKO15516 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLOCKO15516 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLOCKO15516 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CLOCKO15516 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CLOCKO15516 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLOCKO15516 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CLOCKO15516 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLOCKO15516 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms