Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 AL356740.2-201ENST00000601559 647 ntBASIC18.43■□□□□ 0.54
CASQ2O14958 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CASQ2O14958 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CASQ2O14958 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CASQ2O14958 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.43■□□□□ 0.54
CASQ2O14958 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CASQ2O14958 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CASQ2O14958 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CASQ2O14958 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CASQ2O14958 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CASQ2O14958 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CASQ2O14958 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CASQ2O14958 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.42■□□□□ 0.54
CASQ2O14958 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CASQ2O14958 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.42■□□□□ 0.54
CASQ2O14958 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CASQ2O14958 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CASQ2O14958 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.42■□□□□ 0.54
CASQ2O14958 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CASQ2O14958 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CASQ2O14958 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.42■□□□□ 0.54
CASQ2O14958 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.42■□□□□ 0.54
CASQ2O14958 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CASQ2O14958 DUX4L19-201ENST00000557448 1267 ntBASIC18.42■□□□□ 0.54
CASQ2O14958 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.42■□□□□ 0.54
CASQ2O14958 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CASQ2O14958 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CASQ2O14958 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CASQ2O14958 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.42■□□□□ 0.54
CASQ2O14958 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CASQ2O14958 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CASQ2O14958 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.42■□□□□ 0.54
CASQ2O14958 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CASQ2O14958 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CASQ2O14958 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CASQ2O14958 AC141586.3-201ENST00000562166 1838 ntBASIC18.42■□□□□ 0.54
CASQ2O14958 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CASQ2O14958 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CASQ2O14958 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.42■□□□□ 0.54
CASQ2O14958 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CASQ2O14958 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
CASQ2O14958 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.41■□□□□ 0.54
CASQ2O14958 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CASQ2O14958 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CASQ2O14958 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.41■□□□□ 0.54
CASQ2O14958 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CASQ2O14958 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.41■□□□□ 0.54
CASQ2O14958 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CASQ2O14958 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CASQ2O14958 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.41■□□□□ 0.54
CASQ2O14958 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CASQ2O14958 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CASQ2O14958 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CASQ2O14958 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CASQ2O14958 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CASQ2O14958 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.41■□□□□ 0.54
CASQ2O14958 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CASQ2O14958 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.4■□□□□ 0.54
CASQ2O14958 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CASQ2O14958 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.4■□□□□ 0.54
CASQ2O14958 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CASQ2O14958 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.4■□□□□ 0.54
CASQ2O14958 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CASQ2O14958 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CASQ2O14958 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CASQ2O14958 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CASQ2O14958 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CASQ2O14958 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CASQ2O14958 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CASQ2O14958 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CASQ2O14958 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CASQ2O14958 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CASQ2O14958 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CASQ2O14958 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CASQ2O14958 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
CASQ2O14958 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CASQ2O14958 FP475955.4-201ENST00000623131 1990 ntBASIC18.39■□□□□ 0.53
CASQ2O14958 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CASQ2O14958 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.39■□□□□ 0.53
CASQ2O14958 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CASQ2O14958 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CASQ2O14958 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CASQ2O14958 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CASQ2O14958 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CASQ2O14958 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.39■□□□□ 0.53
CASQ2O14958 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CASQ2O14958 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.39■□□□□ 0.53
CASQ2O14958 MIR3621-201ENST00000580529 85 ntBASIC18.39■□□□□ 0.53
CASQ2O14958 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CASQ2O14958 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CASQ2O14958 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CASQ2O14958 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CASQ2O14958 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.39■□□□□ 0.53
CASQ2O14958 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CASQ2O14958 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CASQ2O14958 AC067852.2-201ENST00000590513 2313 ntBASIC18.39■□□□□ 0.53
CASQ2O14958 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CASQ2O14958 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.39■□□□□ 0.53
CASQ2O14958 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.39■□□□□ 0.53
CASQ2O14958 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms