Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 AC141586.3-201ENST00000562166 1838 ntBASIC15.6■□□□□ 0.09
TRAV3A0A0B4J244 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC15.6■□□□□ 0.09
TRAV3A0A0B4J244 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC15.6■□□□□ 0.09
TRAV3A0A0B4J244 GUSBP6-202ENST00000438529 1198 ntBASIC15.6■□□□□ 0.09
TRAV3A0A0B4J244 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV3A0A0B4J244 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC15.6■□□□□ 0.09
TRAV3A0A0B4J244 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC15.6■□□□□ 0.09
TRAV3A0A0B4J244 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TRAV3A0A0B4J244 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC15.6■□□□□ 0.09
TRAV3A0A0B4J244 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC15.6■□□□□ 0.09
TRAV3A0A0B4J244 AC092118.2-201ENST00000613495 667 ntBASIC15.6■□□□□ 0.09
TRAV3A0A0B4J244 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV3A0A0B4J244 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV3A0A0B4J244 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV3A0A0B4J244 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC15.6■□□□□ 0.09
TRAV3A0A0B4J244 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV3A0A0B4J244 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV3A0A0B4J244 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV3A0A0B4J244 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV3A0A0B4J244 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC15.6■□□□□ 0.09
TRAV3A0A0B4J244 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC15.6■□□□□ 0.09
TRAV3A0A0B4J244 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC15.6■□□□□ 0.09
TRAV3A0A0B4J244 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV3A0A0B4J244 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC15.59■□□□□ 0.09
TRAV3A0A0B4J244 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
TRAV3A0A0B4J244 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV3A0A0B4J244 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV3A0A0B4J244 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV3A0A0B4J244 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV3A0A0B4J244 NEFHP1-201ENST00000412845 2629 ntBASIC15.59■□□□□ 0.09
TRAV3A0A0B4J244 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV3A0A0B4J244 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV3A0A0B4J244 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV3A0A0B4J244 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV3A0A0B4J244 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV3A0A0B4J244 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC15.59■□□□□ 0.09
TRAV3A0A0B4J244 PPP1R14BP3-201ENST00000509033 445 ntBASIC15.59■□□□□ 0.09
TRAV3A0A0B4J244 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
TRAV3A0A0B4J244 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
TRAV3A0A0B4J244 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV3A0A0B4J244 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV3A0A0B4J244 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV3A0A0B4J244 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV3A0A0B4J244 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV3A0A0B4J244 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
TRAV3A0A0B4J244 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV3A0A0B4J244 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV3A0A0B4J244 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
TRAV3A0A0B4J244 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV3A0A0B4J244 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC15.59■□□□□ 0.09
TRAV3A0A0B4J244 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV3A0A0B4J244 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV3A0A0B4J244 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV3A0A0B4J244 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC15.59■□□□□ 0.09
TRAV3A0A0B4J244 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV3A0A0B4J244 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV3A0A0B4J244 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC15.58■□□□□ 0.09
TRAV3A0A0B4J244 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
TRAV3A0A0B4J244 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV3A0A0B4J244 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TRAV3A0A0B4J244 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TRAV3A0A0B4J244 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TRAV3A0A0B4J244 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
TRAV3A0A0B4J244 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV3A0A0B4J244 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV3A0A0B4J244 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TRAV3A0A0B4J244 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAV3A0A0B4J244 GATS-209ENST00000454084 1030 ntTSL 3 BASIC15.58■□□□□ 0.08
TRAV3A0A0B4J244 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
TRAV3A0A0B4J244 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC15.58■□□□□ 0.08
TRAV3A0A0B4J244 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV3A0A0B4J244 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV3A0A0B4J244 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV3A0A0B4J244 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV3A0A0B4J244 CROCCP3-202ENST00000420820 1947 ntBASIC15.58■□□□□ 0.08
TRAV3A0A0B4J244 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
TRAV3A0A0B4J244 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV3A0A0B4J244 SDHAP1-207ENST00000440850 2000 ntBASIC15.58■□□□□ 0.08
TRAV3A0A0B4J244 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAV3A0A0B4J244 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV3A0A0B4J244 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAV3A0A0B4J244 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
TRAV3A0A0B4J244 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV3A0A0B4J244 GOLGA6L3-201ENST00000507199 1679 ntBASIC15.57■□□□□ 0.08
TRAV3A0A0B4J244 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV3A0A0B4J244 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRAV3A0A0B4J244 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TRAV3A0A0B4J244 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV3A0A0B4J244 AC006333.2-201ENST00000607957 2099 ntBASIC15.57■□□□□ 0.08
TRAV3A0A0B4J244 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV3A0A0B4J244 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV3A0A0B4J244 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAV3A0A0B4J244 SLC29A4P1-201ENST00000398760 971 ntBASIC15.57■□□□□ 0.08
TRAV3A0A0B4J244 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAV3A0A0B4J244 TSPY6P-201ENST00000448518 926 ntBASIC15.57■□□□□ 0.08
TRAV3A0A0B4J244 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC15.57■□□□□ 0.08
TRAV3A0A0B4J244 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAV3A0A0B4J244 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV3A0A0B4J244 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV3A0A0B4J244 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms