Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC13.74□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 PWWP2AP1-201ENST00000429776 2273 ntBASIC13.74□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC13.74□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC13.74□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 KRT18P68-201ENST00000392293 1000 ntBASIC13.74□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 LSM12P1-201ENST00000411836 588 ntBASIC13.74□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC13.74□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC13.74□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC13.74□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC13.74□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC13.74□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC13.74□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 PFKL-212ENST00000628044 129 ntTSL 3 BASIC13.74□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC13.74□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC13.74□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC13.74□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC13.74□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 TREX1-205ENST00000625293 1783 ntBASIC13.73□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC13.73□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC13.73□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC13.73□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 GXYLT1P5-201ENST00000614548 1189 ntBASIC13.73□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 MIR2861-201ENST00000636310 90 ntBASIC13.73□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC13.73□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC13.73□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC13.73□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 AC007613.1-201ENST00000572811 2597 ntBASIC13.73□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC13.72□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC13.72□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 Z82202.1-201ENST00000623446 1880 ntBASIC13.72□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 PTGES2-AS1-201ENST00000443493 2100 ntBASIC13.72□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-3A0A0A6YYJ7 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms