Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRBV20-1A0A075B6N2 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRBV20-1A0A075B6N2 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRBV20-1A0A075B6N2 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRBV20-1A0A075B6N2 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC12.97□□□□□ -0.33
TRBV20-1A0A075B6N2 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC12.97□□□□□ -0.33
TRBV20-1A0A075B6N2 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
TRBV20-1A0A075B6N2 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRBV20-1A0A075B6N2 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRBV20-1A0A075B6N2 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRBV20-1A0A075B6N2 CD276-203ENST00000537340 2439 ntTSL 2 BASIC12.97□□□□□ -0.33
TRBV20-1A0A075B6N2 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC12.96□□□□□ -0.33
TRBV20-1A0A075B6N2 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRBV20-1A0A075B6N2 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
TRBV20-1A0A075B6N2 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRBV20-1A0A075B6N2 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
TRBV20-1A0A075B6N2 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRBV20-1A0A075B6N2 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
TRBV20-1A0A075B6N2 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRBV20-1A0A075B6N2 LINC01126-201ENST00000623515 1646 ntBASIC12.96□□□□□ -0.33
TRBV20-1A0A075B6N2 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRBV20-1A0A075B6N2 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRBV20-1A0A075B6N2 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC12.96□□□□□ -0.33
TRBV20-1A0A075B6N2 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRBV20-1A0A075B6N2 BX119927.1-201ENST00000636596 1552 ntBASIC12.96□□□□□ -0.33
TRBV20-1A0A075B6N2 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRBV20-1A0A075B6N2 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRBV20-1A0A075B6N2 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRBV20-1A0A075B6N2 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRBV20-1A0A075B6N2 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRBV20-1A0A075B6N2 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRBV20-1A0A075B6N2 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRBV20-1A0A075B6N2 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRBV20-1A0A075B6N2 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRBV20-1A0A075B6N2 AC068587.7-201ENST00000641602 218 ntBASIC12.96□□□□□ -0.33
TRBV20-1A0A075B6N2 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
TRBV20-1A0A075B6N2 AL596257.1-201ENST00000641463 2694 ntBASIC12.96□□□□□ -0.33
TRBV20-1A0A075B6N2 MADD-208ENST00000405573 1823 ntTSL 5 BASIC12.96□□□□□ -0.33
TRBV20-1A0A075B6N2 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC12.96□□□□□ -0.33
TRBV20-1A0A075B6N2 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRBV20-1A0A075B6N2 AC008764.6-201ENST00000595909 2069 ntBASIC12.96□□□□□ -0.33
TRBV20-1A0A075B6N2 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
TRBV20-1A0A075B6N2 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
TRBV20-1A0A075B6N2 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
TRBV20-1A0A075B6N2 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TRBV20-1A0A075B6N2 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TRBV20-1A0A075B6N2 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
TRBV20-1A0A075B6N2 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TRBV20-1A0A075B6N2 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
TRBV20-1A0A075B6N2 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
TRBV20-1A0A075B6N2 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
TRBV20-1A0A075B6N2 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
TRBV20-1A0A075B6N2 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
TRBV20-1A0A075B6N2 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC12.96□□□□□ -0.34
TRBV20-1A0A075B6N2 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV20-1A0A075B6N2 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV20-1A0A075B6N2 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV20-1A0A075B6N2 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV20-1A0A075B6N2 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
TRBV20-1A0A075B6N2 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV20-1A0A075B6N2 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
TRBV20-1A0A075B6N2 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV20-1A0A075B6N2 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
TRBV20-1A0A075B6N2 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC12.95□□□□□ -0.34
TRBV20-1A0A075B6N2 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV20-1A0A075B6N2 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV20-1A0A075B6N2 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC12.95□□□□□ -0.34
TRBV20-1A0A075B6N2 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV20-1A0A075B6N2 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
TRBV20-1A0A075B6N2 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
TRBV20-1A0A075B6N2 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV20-1A0A075B6N2 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC12.95□□□□□ -0.34
TRBV20-1A0A075B6N2 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC12.95□□□□□ -0.34
TRBV20-1A0A075B6N2 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC12.95□□□□□ -0.34
TRBV20-1A0A075B6N2 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
TRBV20-1A0A075B6N2 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV20-1A0A075B6N2 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV20-1A0A075B6N2 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV20-1A0A075B6N2 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC12.95□□□□□ -0.34
TRBV20-1A0A075B6N2 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
TRBV20-1A0A075B6N2 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV20-1A0A075B6N2 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC12.95□□□□□ -0.34
TRBV20-1A0A075B6N2 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV20-1A0A075B6N2 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC12.95□□□□□ -0.34
TRBV20-1A0A075B6N2 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
TRBV20-1A0A075B6N2 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV20-1A0A075B6N2 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV20-1A0A075B6N2 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC12.94□□□□□ -0.34
TRBV20-1A0A075B6N2 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
TRBV20-1A0A075B6N2 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
TRBV20-1A0A075B6N2 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC12.94□□□□□ -0.34
TRBV20-1A0A075B6N2 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV20-1A0A075B6N2 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV20-1A0A075B6N2 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
TRBV20-1A0A075B6N2 AC126763.1-201ENST00000552015 2118 ntBASIC12.94□□□□□ -0.34
TRBV20-1A0A075B6N2 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV20-1A0A075B6N2 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV20-1A0A075B6N2 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV20-1A0A075B6N2 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC12.94□□□□□ -0.34
TRBV20-1A0A075B6N2 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms