Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 GPATCH4-201ENST00000368232 1972 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 AC010969.2-201ENST00000602458 3231 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 NTPCR-201ENST00000366627 1762 ntTSL 3 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 CUBNP3-201ENST00000457461 1784 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 ZNF334-201ENST00000347606 3890 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 SLC14A2-201ENST00000255226 4746 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 TESK2-201ENST00000372084 2600 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 GHR-212ENST00000620156 4529 ntTSL 5 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 COA1-203ENST00000395879 2448 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 DYRK1A-204ENST00000398960 2422 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 AC138907.1-201ENST00000570183 2405 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 GOLGA8B-201ENST00000342314 4335 ntAPPRIS P2 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 ATP6V0A1-201ENST00000264649 4110 ntAPPRIS P4 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 EGFLAM-202ENST00000336740 3071 ntTSL 2 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 ATP8B5P-201ENST00000329395 2869 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 CRP-201ENST00000255030 2015 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 ABCF2-202ENST00000287844 3546 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 IFT122-210ENST00000504021 3541 ntTSL 2 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 TUBB-205ENST00000327892 2670 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 LDB2-202ENST00000441778 2476 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 SMG1P6-201ENST00000532337 2930 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 CPM-201ENST00000338356 6636 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 CTNNB1-203ENST00000396185 3356 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 HS3ST5-202ENST00000411826 2744 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 MATN2-213ENST00000522025 2731 ntTSL 5 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 LINC00243-201ENST00000399196 2052 ntTSL 2 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 BMS1P1-202ENST00000580094 4294 ntTSL 5 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 PDIA6-202ENST00000381611 2534 ntTSL 2 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 CD164-201ENST00000275080 2954 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 SLAMF8-201ENST00000289707 2996 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 NCAM1-226ENST00000619839 2993 ntTSL 5 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 ZNF641-202ENST00000448928 1856 ntTSL 2 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 CDK19-201ENST00000323817 6067 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 AP000708.1-201ENST00000527818 3423 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 NOS1-203ENST00000344089 4340 ntTSL 5 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 STEAP3-AS1-201ENST00000454260 3218 ntTSL 2 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 IL2RB-201ENST00000216223 4113 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 C11orf49-202ENST00000378615 1651 ntAPPRIS ALT1 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 GNL3L-202ENST00000360845 2135 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 CNR1-206ENST00000549890 2122 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 AC006213.1-201ENST00000586860 2550 ntTSL 2 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 SRSF10-204ENST00000344989 3487 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 CSF3R-203ENST00000373103 3454 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 CYB5B-202ENST00000512062 4358 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 RASSF2-201ENST00000379376 5282 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 BUB1B-201ENST00000287598 3725 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 ZNF347-207ENST00000601469 2812 ntAPPRIS ALT2 TSL 2 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 CPM-211ENST00000551568 6655 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 MALAT1-202ENST00000534336 8708 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 AL133492.1-201ENST00000617854 3955 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 AC009403.2-202ENST00000636307 3956 ntTSL 5 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 PPP3CB-202ENST00000360663 3501 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 OPTN-203ENST00000378748 3521 ntAPPRIS P2 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 AC004944.1-201ENST00000517807 3059 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 ZNF559-213ENST00000603380 3054 ntAPPRIS P3 TSL 2 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 TMPRSS7-203ENST00000452346 2616 ntTSL 5 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 ATXN1-201ENST00000244769 10602 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 ZFHX3-203ENST00000397992 13841 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 C2orf42-205ENST00000420306 2193 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 ADAM21P1-201ENST00000529267 2170 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 FMOD-201ENST00000354955 3310 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 AC124798.1-201ENST00000568280 2883 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 CYP4F35P-201ENST00000582957 2876 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 CNTRL-212ENST00000613863 2418 ntTSL 5 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 MAPK10-255ENST00000641020 2412 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 AC244034.3-201ENST00000624347 3135 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 C20orf173-201ENST00000246199 1034 ntAPPRIS ALT2 TSL 2 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 NME9-202ENST00000333911 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 MORN3-201ENST00000355329 3803 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 CD300A-203ENST00000361933 382 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 Y_RNA.123-201ENST00000363338 102 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 Y_RNA.377-201ENST00000365644 108 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 BPIFA3-202ENST00000375454 1116 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 C5orf56-202ENST00000378947 621 ntAPPRIS ALT2 TSL 2 BASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 RNU6-1286P-201ENST00000383871 107 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 RNU6-144P-201ENST00000383951 107 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 RNU6-1080P-201ENST00000383982 107 ntBASIC1.84□□□□□ -2.11
KRTAP4-4Q9BYR3 Y_RNA.432-201ENST00000384087 111 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms