RNA–Protein interactions for RNA: ENST00000619839.4

NCAM1-226, Transcript of neural cell adhesion molecule 1, humanhuman

TSL 5 BASIC

Gene NCAM1, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-226ENST00000619839 NISCHQ9Y2I1 1504 aa20.83■□□□□ 0.92
NCAM1-226ENST00000619839 SHROOM4Q9ULL8 1493 aa18.26■□□□□ 0.51
NCAM1-226ENST00000619839 HRCP23327 699 aa18.19■□□□□ 0.5
NCAM1-226ENST00000619839 SUPT5HO00267 1087 aaKnown RBP18.15■□□□□ 0.5
NCAM1-226ENST00000619839 MYO15BQ96JP2 1530 aa17.94■□□□□ 0.46
NCAM1-226ENST00000619839 PCGF6Q9BYE7 350 aa17.86■□□□□ 0.45
NCAM1-226ENST00000619839 CHIC1Q5VXU3 224 aa17.85■□□□□ 0.45
NCAM1-226ENST00000619839 PPARGC1BQ86YN6 1023 aaKnown RBP17.79■□□□□ 0.44
NCAM1-226ENST00000619839 ZCCHC6Q5VYS8 1495 aaKnown RBP17.72■□□□□ 0.43
NCAM1-226ENST00000619839 PELP1Q8IZL8 1130 aaKnown RBP17.59■□□□□ 0.41
NCAM1-226ENST00000619839 DCAF1Q9Y4B6 1507 aa17.55■□□□□ 0.4
NCAM1-226ENST00000619839 LOC105371045A0A1W2PR82 267 aa17.4■□□□□ 0.38
NCAM1-226ENST00000619839 CCDC180Q9P1Z9 1646 aa17.38■□□□□ 0.37
NCAM1-226ENST00000619839 TRIM26Q12899 539 aaPredicted RBP17.36■□□□□ 0.37
NCAM1-226ENST00000619839 DCAF8L2P0C7V8 631 aa17.27■□□□□ 0.35
NCAM1-226ENST00000619839 MYT1Q01538 1121 aa17.22■□□□□ 0.35
NCAM1-226ENST00000619839 ZEB1P37275 1124 aaPredicted RBP17.17■□□□□ 0.34
NCAM1-226ENST00000619839 SCAF1Q9H7N4 1312 aaKnown RBP17.11■□□□□ 0.33
NCAM1-226ENST00000619839 TRIM41Q8WV44 630 aa16.82■□□□□ 0.28
NCAM1-226ENST00000619839 ABCC9O60706 1549 aa16.8■□□□□ 0.28
NCAM1-226ENST00000619839 FAM9AQ8IZU1 332 aaPredicted RBP16.77■□□□□ 0.28
NCAM1-226ENST00000619839 ACIN1Q9UKV3 1341 aaKnown RBP16.75■□□□□ 0.27
NCAM1-226ENST00000619839 PRKCSHP14314 528 aaPredicted RBP16.74■□□□□ 0.27
NCAM1-226ENST00000619839 RSF1Q96T23 1441 aaPredicted RBP16.72■□□□□ 0.27
NCAM1-226ENST00000619839 NEUROD1Q13562 356 aa16.7■□□□□ 0.26
NCAM1-226ENST00000619839 EHMT2Q96KQ7 1210 aa16.66■□□□□ 0.26
NCAM1-226ENST00000619839 RB1CC1Q8TDY2 1594 aa16.62■□□□□ 0.25
NCAM1-226ENST00000619839 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.61■□□□□ 0.25
NCAM1-226ENST00000619839 GTF3C3Q9Y5Q9 886 aa16.59■□□□□ 0.25
NCAM1-226ENST00000619839 CCER1Q8TC90 406 aaPredicted RBP16.57■□□□□ 0.24
NCAM1-226ENST00000619839 CENPBP07199 599 aaPredicted RBP16.55■□□□□ 0.24
NCAM1-226ENST00000619839 DIEXFQ68CQ4 756 aaKnown RBP16.53■□□□□ 0.24
NCAM1-226ENST00000619839 TTBK1Q5TCY1 1321 aaPredicted RBP16.53■□□□□ 0.24
NCAM1-226ENST00000619839 SCRIBQ14160 1630 aa16.5■□□□□ 0.23
NCAM1-226ENST00000619839 CECR2Q9BXF3 1484 aa16.28■□□□□ 0.2
NCAM1-226ENST00000619839 ZNF316A6NFI3 1004 aaPredicted RBP16.26■□□□□ 0.19
NCAM1-226ENST00000619839 BCL11AQ9H165 835 aa16.26■□□□□ 0.19
NCAM1-226ENST00000619839 MROH2BQ7Z745 1585 aa16.25■□□□□ 0.19
NCAM1-226ENST00000619839 WRNQ14191 1432 aaPredicted RBP eCLIP16.25■□□□□ 0.19
NCAM1-226ENST00000619839 YTHDC1Q96MU7 727 aaKnown RBP16.22■□□□□ 0.19
NCAM1-226ENST00000619839 WIZO95785 1651 aa16.19■□□□□ 0.18
NCAM1-226ENST00000619839 EIF4G1Q04637 1599 aaKnown RBP16.16■□□□□ 0.18
NCAM1-226ENST00000619839 CEP162Q5TB80 1403 aa16.16■□□□□ 0.18
NCAM1-226ENST00000619839 MIER1Q8N108 512 aa16.13■□□□□ 0.17
NCAM1-226ENST00000619839 APLP2Q06481 763 aa16.09■□□□□ 0.17
NCAM1-226ENST00000619839 BAZ1AQ9NRL2 1556 aaPredicted RBP16.09■□□□□ 0.17
NCAM1-226ENST00000619839 TNIKQ9UKE5 1360 aa16.07■□□□□ 0.16
NCAM1-226ENST00000619839 CCDC88BA6NC98 1476 aa16.07■□□□□ 0.16
NCAM1-226ENST00000619839 ABCC8Q09428 1581 aa16.04■□□□□ 0.16
NCAM1-226ENST00000619839 ERICH6Q7L0X2 663 aa16.02■□□□□ 0.16
NCAM1-226ENST00000619839 SOGA1O94964 1423 aa16.01■□□□□ 0.15
NCAM1-226ENST00000619839 SLC24A1O60721 1099 aa15.99■□□□□ 0.15
NCAM1-226ENST00000619839 NACADO15069 1562 aa15.98■□□□□ 0.15
NCAM1-226ENST00000619839 UBTFP17480 764 aaKnown RBP15.96■□□□□ 0.15
NCAM1-226ENST00000619839 CSRNP3Q8WYN3 585 aa15.95■□□□□ 0.14
NCAM1-226ENST00000619839 HNRNPUL2Q1KMD3 747 aaKnown RBP15.94■□□□□ 0.14
NCAM1-226ENST00000619839 EEA1Q15075 1411 aa15.93■□□□□ 0.14
NCAM1-226ENST00000619839 RUSC2Q8N2Y8 1516 aa15.91■□□□□ 0.14
NCAM1-226ENST00000619839 TOP2AP11388 1531 aaKnown RBP15.9■□□□□ 0.14
NCAM1-226ENST00000619839 GOLGA3Q08378 1498 aa15.88■□□□□ 0.13
NCAM1-226ENST00000619839 SMARCA2P51531 1590 aa15.85■□□□□ 0.13
NCAM1-226ENST00000619839 CLSPNQ9HAW4 1339 aa15.84■□□□□ 0.13
NCAM1-226ENST00000619839 SUPT16HQ9Y5B9 1047 aaKnown RBP15.84■□□□□ 0.13
NCAM1-226ENST00000619839 SMARCA4P51532 1647 aa15.75■□□□□ 0.11
NCAM1-226ENST00000619839 CLIP1P30622 1438 aa15.74■□□□□ 0.11
NCAM1-226ENST00000619839 TSHZ2Q9NRE2 1034 aa15.74■□□□□ 0.11
NCAM1-226ENST00000619839 VPS8Q8N3P4 1428 aa15.73■□□□□ 0.11
NCAM1-226ENST00000619839 CEP164Q9UPV0 1460 aa15.73■□□□□ 0.11
NCAM1-226ENST00000619839 ANP32EQ9BTT0 268 aa15.69■□□□□ 0.1
NCAM1-226ENST00000619839 KIF21BO75037 1637 aa15.68■□□□□ 0.1
NCAM1-226ENST00000619839 DHX57Q6P158 1386 aaKnown RBP15.67■□□□□ 0.1
NCAM1-226ENST00000619839 BAZ1BQ9UIG0 1483 aaKnown RBP15.6■□□□□ 0.09
NCAM1-226ENST00000619839 SYNJ1O43426 1573 aa15.58■□□□□ 0.09
NCAM1-226ENST00000619839 RAPGEF2Q9Y4G8 1499 aa15.58■□□□□ 0.08
NCAM1-226ENST00000619839 RANGAP1P46060 587 aaPredicted RBP15.57■□□□□ 0.08
NCAM1-226ENST00000619839 KCNH8Q96L42 1107 aa15.52■□□□□ 0.07
NCAM1-226ENST00000619839 BCANQ96GW7 911 aa15.49■□□□□ 0.07
NCAM1-226ENST00000619839 KANK4Q5T7N3 995 aaPredicted RBP15.47■□□□□ 0.07
NCAM1-226ENST00000619839 FKBP8Q14318 412 aa15.44■□□□□ 0.06
NCAM1-226ENST00000619839 RRBP1Q9P2E9 1410 aaKnown RBP15.44■□□□□ 0.06
NCAM1-226ENST00000619839 CUX2O14529 1486 aa15.43■□□□□ 0.06
NCAM1-226ENST00000619839 ARAP1Q96P48 1450 aa15.42■□□□□ 0.06
NCAM1-226ENST00000619839 UNC13AQ9UPW8 1703 aa15.42■□□□□ 0.06
NCAM1-226ENST00000619839 PEG3Q9GZU2 1588 aa15.38■□□□□ 0.05
NCAM1-226ENST00000619839 RBM19Q9Y4C8 960 aaKnown RBP15.38■□□□□ 0.05
NCAM1-226ENST00000619839 CCNB3Q8WWL7 1395 aa15.36■□□□□ 0.05
NCAM1-226ENST00000619839 ERICH3Q5RHP9 1530 aa15.34■□□□□ 0.05
NCAM1-226ENST00000619839 PRXQ9BXM0 1461 aa15.33■□□□□ 0.05
NCAM1-226ENST00000619839 ITGAEP38570 1179 aa15.33■□□□□ 0.04
NCAM1-226ENST00000619839 DDX10Q13206 875 aaKnown RBP15.33■□□□□ 0.04
NCAM1-226ENST00000619839 MAPKBP1O60336 1514 aa15.32■□□□□ 0.04
NCAM1-226ENST00000619839 NEFLP07196 543 aa15.32■□□□□ 0.04
NCAM1-226ENST00000619839 TOP2BQ02880 1626 aa15.31■□□□□ 0.04
NCAM1-226ENST00000619839 RAB3GAP2Q9H2M9 1393 aa15.31■□□□□ 0.04
NCAM1-226ENST00000619839 PABPN1Q86U42 306 aaKnown RBP eCLIP15.29■□□□□ 0.04
NCAM1-226ENST00000619839 PPP1R15AO75807 674 aaPredicted RBP15.27■□□□□ 0.03
NCAM1-226ENST00000619839 DAXXQ9UER7 740 aaPredicted RBP15.27■□□□□ 0.03
NCAM1-226ENST00000619839 WDR97A6NE52 1622 aa15.25■□□□□ 0.03
NCAM1-226ENST00000619839 EIF5BO60841 1220 aaKnown RBP15.25■□□□□ 0.03
NCAM1-226ENST00000619839 TRIM52Q96A61 297 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms