RNA–Protein interactions for RNA: ENST00000360663.9

PPP3CB-202, Transcript of protein phosphatase 3 catalytic subunit beta, humanhuman

TSL 1 (best) BASIC

Gene PPP3CB, Length 3,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CB-202ENST00000360663 NISCHQ9Y2I1 1504 aa18.88■□□□□ 0.61
PPP3CB-202ENST00000360663 SHROOM4Q9ULL8 1493 aa16.94■□□□□ 0.3
PPP3CB-202ENST00000360663 SUPT5HO00267 1087 aaKnown RBP16.78■□□□□ 0.28
PPP3CB-202ENST00000360663 DCAF8L2P0C7V8 631 aa16.49■□□□□ 0.23
PPP3CB-202ENST00000360663 PCGF6Q9BYE7 350 aa16.11■□□□□ 0.17
PPP3CB-202ENST00000360663 CHIC1Q5VXU3 224 aa16.1■□□□□ 0.17
PPP3CB-202ENST00000360663 MYO15BQ96JP2 1530 aa16■□□□□ 0.15
PPP3CB-202ENST00000360663 HRCP23327 699 aa15.99■□□□□ 0.15
PPP3CB-202ENST00000360663 ZCCHC6Q5VYS8 1495 aaKnown RBP15.94■□□□□ 0.14
PPP3CB-202ENST00000360663 PPARGC1BQ86YN6 1023 aaKnown RBP15.92■□□□□ 0.14
PPP3CB-202ENST00000360663 LOC105371045A0A1W2PR82 267 aa15.89■□□□□ 0.13
PPP3CB-202ENST00000360663 EHMT2Q96KQ7 1210 aa15.7■□□□□ 0.1
PPP3CB-202ENST00000360663 CCDC180Q9P1Z9 1646 aa15.61■□□□□ 0.09
PPP3CB-202ENST00000360663 FAM9AQ8IZU1 332 aaPredicted RBP15.6■□□□□ 0.09
PPP3CB-202ENST00000360663 TRIM26Q12899 539 aaPredicted RBP15.49■□□□□ 0.07
PPP3CB-202ENST00000360663 TRIM41Q8WV44 630 aa15.44■□□□□ 0.06
PPP3CB-202ENST00000360663 DCAF1Q9Y4B6 1507 aa15.39■□□□□ 0.05
PPP3CB-202ENST00000360663 TTBK1Q5TCY1 1321 aaPredicted RBP15.2■□□□□ 0.02
PPP3CB-202ENST00000360663 RSF1Q96T23 1441 aaPredicted RBP15.17■□□□□ 0.02
PPP3CB-202ENST00000360663 SCRIBQ14160 1630 aa15.16■□□□□ 0.02
PPP3CB-202ENST00000360663 ZEB1P37275 1124 aaPredicted RBP15.16■□□□□ 0.02
PPP3CB-202ENST00000360663 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.07■□□□□ 0
PPP3CB-202ENST00000360663 ABCC9O60706 1549 aa15.04■□□□□ -0
PPP3CB-202ENST00000360663 CCER1Q8TC90 406 aaPredicted RBP15.02■□□□□ -0
PPP3CB-202ENST00000360663 RB1CC1Q8TDY2 1594 aa15.02□□□□□ -0.01
PPP3CB-202ENST00000360663 SCAF1Q9H7N4 1312 aaKnown RBP14.98□□□□□ -0.01
PPP3CB-202ENST00000360663 CECR2Q9BXF3 1484 aa14.94□□□□□ -0.02
PPP3CB-202ENST00000360663 MROH2BQ7Z745 1585 aa14.81□□□□□ -0.04
PPP3CB-202ENST00000360663 UBTFP17480 764 aaKnown RBP14.78□□□□□ -0.04
PPP3CB-202ENST00000360663 NEUROD1Q13562 356 aa14.76□□□□□ -0.05
PPP3CB-202ENST00000360663 DIEXFQ68CQ4 756 aaKnown RBP14.76□□□□□ -0.05
PPP3CB-202ENST00000360663 RANGAP1P46060 587 aaPredicted RBP14.73□□□□□ -0.05
PPP3CB-202ENST00000360663 PELP1Q8IZL8 1130 aaKnown RBP14.72□□□□□ -0.05
PPP3CB-202ENST00000360663 WIZO95785 1651 aa14.72□□□□□ -0.05
PPP3CB-202ENST00000360663 YTHDC1Q96MU7 727 aaKnown RBP14.71□□□□□ -0.05
PPP3CB-202ENST00000360663 ACIN1Q9UKV3 1341 aaKnown RBP14.71□□□□□ -0.05
PPP3CB-202ENST00000360663 GTF3C3Q9Y5Q9 886 aa14.69□□□□□ -0.06
PPP3CB-202ENST00000360663 HNRNPUL2Q1KMD3 747 aaKnown RBP14.65□□□□□ -0.06
PPP3CB-202ENST00000360663 CENPBP07199 599 aaPredicted RBP14.64□□□□□ -0.07
PPP3CB-202ENST00000360663 ABCC8Q09428 1581 aa14.61□□□□□ -0.07
PPP3CB-202ENST00000360663 CCDC88BA6NC98 1476 aa14.6□□□□□ -0.07
PPP3CB-202ENST00000360663 SOGA1O94964 1423 aa14.59□□□□□ -0.07
PPP3CB-202ENST00000360663 PABPN1Q86U42 306 aaKnown RBP eCLIP14.58□□□□□ -0.07
PPP3CB-202ENST00000360663 CSRNP3Q8WYN3 585 aa14.57□□□□□ -0.08
PPP3CB-202ENST00000360663 NACADO15069 1562 aa14.56□□□□□ -0.08
PPP3CB-202ENST00000360663 CEP162Q5TB80 1403 aa14.56□□□□□ -0.08
PPP3CB-202ENST00000360663 ZNF316A6NFI3 1004 aaPredicted RBP14.5□□□□□ -0.09
PPP3CB-202ENST00000360663 RUSC2Q8N2Y8 1516 aa14.49□□□□□ -0.09
PPP3CB-202ENST00000360663 APLP2Q06481 763 aa14.47□□□□□ -0.09
PPP3CB-202ENST00000360663 BAZ1AQ9NRL2 1556 aaPredicted RBP14.45□□□□□ -0.1
PPP3CB-202ENST00000360663 MIER1Q8N108 512 aa14.43□□□□□ -0.1
PPP3CB-202ENST00000360663 TNIKQ9UKE5 1360 aa14.42□□□□□ -0.1
PPP3CB-202ENST00000360663 WRNQ14191 1432 aaPredicted RBP eCLIP14.36□□□□□ -0.11
PPP3CB-202ENST00000360663 TOP2AP11388 1531 aaKnown RBP14.34□□□□□ -0.11
PPP3CB-202ENST00000360663 SMARCA2P51531 1590 aa14.31□□□□□ -0.12
PPP3CB-202ENST00000360663 EIF4G1Q04637 1599 aaKnown RBP14.3□□□□□ -0.12
PPP3CB-202ENST00000360663 GOLGA3Q08378 1498 aa14.29□□□□□ -0.12
PPP3CB-202ENST00000360663 ITGAEP38570 1179 aa14.29□□□□□ -0.12
PPP3CB-202ENST00000360663 SMARCA4P51532 1647 aa14.28□□□□□ -0.12
PPP3CB-202ENST00000360663 CLIP1P30622 1438 aa14.27□□□□□ -0.13
PPP3CB-202ENST00000360663 EEA1Q15075 1411 aa14.24□□□□□ -0.13
PPP3CB-202ENST00000360663 CEP164Q9UPV0 1460 aa14.17□□□□□ -0.14
PPP3CB-202ENST00000360663 RAPGEF2Q9Y4G8 1499 aa14.15□□□□□ -0.14
PPP3CB-202ENST00000360663 KANK4Q5T7N3 995 aaPredicted RBP14.14□□□□□ -0.15
PPP3CB-202ENST00000360663 VPS8Q8N3P4 1428 aa14.12□□□□□ -0.15
PPP3CB-202ENST00000360663 SYNJ1O43426 1573 aa14.1□□□□□ -0.15
PPP3CB-202ENST00000360663 ATP1B4Q9UN42 357 aaPredicted RBP14.08□□□□□ -0.16
PPP3CB-202ENST00000360663 BAZ1BQ9UIG0 1483 aaKnown RBP14.03□□□□□ -0.16
PPP3CB-202ENST00000360663 BCANQ96GW7 911 aa14.02□□□□□ -0.17
PPP3CB-202ENST00000360663 UNC13AQ9UPW8 1703 aa14.01□□□□□ -0.17
PPP3CB-202ENST00000360663 KCNH8Q96L42 1107 aa14.01□□□□□ -0.17
PPP3CB-202ENST00000360663 DHX57Q6P158 1386 aaKnown RBP14□□□□□ -0.17
PPP3CB-202ENST00000360663 KIF21BO75037 1637 aa13.99□□□□□ -0.17
PPP3CB-202ENST00000360663 ATAD2BQ9ULI0 1458 aa13.98□□□□□ -0.17
PPP3CB-202ENST00000360663 SUPT16HQ9Y5B9 1047 aaKnown RBP13.98□□□□□ -0.17
PPP3CB-202ENST00000360663 P3H3Q8IVL6 736 aa13.98□□□□□ -0.17
PPP3CB-202ENST00000360663 HIRIP3Q9BW71 556 aaPredicted RBP13.97□□□□□ -0.17
PPP3CB-202ENST00000360663 MYT1Q01538 1121 aa13.97□□□□□ -0.17
PPP3CB-202ENST00000360663 FAM50AQ14320 339 aaKnown RBP13.95□□□□□ -0.18
PPP3CB-202ENST00000360663 BICRAQ9NZM4 1560 aa13.93□□□□□ -0.18
PPP3CB-202ENST00000360663 DDX10Q13206 875 aaKnown RBP13.93□□□□□ -0.18
PPP3CB-202ENST00000360663 SIN3AQ96ST3 1273 aa13.91□□□□□ -0.18
PPP3CB-202ENST00000360663 ARAP1Q96P48 1450 aa13.88□□□□□ -0.19
PPP3CB-202ENST00000360663 CLSPNQ9HAW4 1339 aa13.87□□□□□ -0.19
PPP3CB-202ENST00000360663 CCNB3Q8WWL7 1395 aa13.87□□□□□ -0.19
PPP3CB-202ENST00000360663 FKBP8Q14318 412 aa13.84□□□□□ -0.19
PPP3CB-202ENST00000360663 TRIM52Q96A61 297 aa13.83□□□□□ -0.2
PPP3CB-202ENST00000360663 KIF27Q86VH2 1401 aa13.82□□□□□ -0.2
PPP3CB-202ENST00000360663 RAB3GAP2Q9H2M9 1393 aa13.82□□□□□ -0.2
PPP3CB-202ENST00000360663 PRXQ9BXM0 1461 aa13.8□□□□□ -0.2
PPP3CB-202ENST00000360663 TSHZ2Q9NRE2 1034 aa13.8□□□□□ -0.2
PPP3CB-202ENST00000360663 PEG3Q9GZU2 1588 aa13.79□□□□□ -0.2
PPP3CB-202ENST00000360663 TOP2BQ02880 1626 aa13.78□□□□□ -0.2
PPP3CB-202ENST00000360663 RRBP1Q9P2E9 1410 aaKnown RBP13.74□□□□□ -0.21
PPP3CB-202ENST00000360663 ARHGAP35Q9NRY4 1499 aa13.74□□□□□ -0.21
PPP3CB-202ENST00000360663 NEFLP07196 543 aa13.73□□□□□ -0.21
PPP3CB-202ENST00000360663 CUX1P39880 1505 aa13.73□□□□□ -0.21
PPP3CB-202ENST00000360663 CUX2O14529 1486 aa13.72□□□□□ -0.21
PPP3CB-202ENST00000360663 ANP32CO43423 234 aa13.7□□□□□ -0.22
PPP3CB-202ENST00000360663 ERICH3Q5RHP9 1530 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms