RNA–Protein interactions for RNA: ENST00000527818.1

AP000708.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000708.1, Length 3,423 nt, Biotype bidirectional promoter lncRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000708.1-201ENST00000527818 NISCHQ9Y2I1 1504 aa20.57■□□□□ 0.88
AP000708.1-201ENST00000527818 CCDC180Q9P1Z9 1646 aa18.9■□□□□ 0.62
AP000708.1-201ENST00000527818 SHROOM4Q9ULL8 1493 aa18■□□□□ 0.47
AP000708.1-201ENST00000527818 HRCP23327 699 aa18■□□□□ 0.47
AP000708.1-201ENST00000527818 MYO15BQ96JP2 1530 aa17.94■□□□□ 0.46
AP000708.1-201ENST00000527818 DCAF1Q9Y4B6 1507 aa17.92■□□□□ 0.46
AP000708.1-201ENST00000527818 SUPT5HO00267 1087 aaKnown RBP17.79■□□□□ 0.44
AP000708.1-201ENST00000527818 PPARGC1BQ86YN6 1023 aaKnown RBP17.75■□□□□ 0.43
AP000708.1-201ENST00000527818 PCGF6Q9BYE7 350 aa17.62■□□□□ 0.41
AP000708.1-201ENST00000527818 CHIC1Q5VXU3 224 aa17.59■□□□□ 0.41
AP000708.1-201ENST00000527818 ZCCHC6Q5VYS8 1495 aaKnown RBP17.51■□□□□ 0.39
AP000708.1-201ENST00000527818 LOC105371045A0A1W2PR82 267 aa17.19■□□□□ 0.34
AP000708.1-201ENST00000527818 NACADO15069 1562 aa17.1■□□□□ 0.33
AP000708.1-201ENST00000527818 SCAF1Q9H7N4 1312 aaKnown RBP17.08■□□□□ 0.32
AP000708.1-201ENST00000527818 TRIM26Q12899 539 aaPredicted RBP17.03■□□□□ 0.32
AP000708.1-201ENST00000527818 PELP1Q8IZL8 1130 aaKnown RBP17.01■□□□□ 0.31
AP000708.1-201ENST00000527818 UNC13AQ9UPW8 1703 aa16.83■□□□□ 0.28
AP000708.1-201ENST00000527818 DCAF8L2P0C7V8 631 aa16.74■□□□□ 0.27
AP000708.1-201ENST00000527818 ZEB1P37275 1124 aaPredicted RBP16.73■□□□□ 0.27
AP000708.1-201ENST00000527818 RB1CC1Q8TDY2 1594 aa16.7■□□□□ 0.26
AP000708.1-201ENST00000527818 ABCC9O60706 1549 aa16.64■□□□□ 0.25
AP000708.1-201ENST00000527818 NEUROD1Q13562 356 aa16.59■□□□□ 0.25
AP000708.1-201ENST00000527818 ACIN1Q9UKV3 1341 aaKnown RBP16.56■□□□□ 0.24
AP000708.1-201ENST00000527818 RSF1Q96T23 1441 aaPredicted RBP16.45■□□□□ 0.22
AP000708.1-201ENST00000527818 FAM9AQ8IZU1 332 aaPredicted RBP16.45■□□□□ 0.22
AP000708.1-201ENST00000527818 PEG3Q9GZU2 1588 aa16.43■□□□□ 0.22
AP000708.1-201ENST00000527818 GTF3C3Q9Y5Q9 886 aa16.42■□□□□ 0.22
AP000708.1-201ENST00000527818 TRIM41Q8WV44 630 aa16.41■□□□□ 0.22
AP000708.1-201ENST00000527818 EHMT2Q96KQ7 1210 aa16.4■□□□□ 0.22
AP000708.1-201ENST00000527818 BICRAQ9NZM4 1560 aa16.39■□□□□ 0.21
AP000708.1-201ENST00000527818 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.38■□□□□ 0.21
AP000708.1-201ENST00000527818 SCRIBQ14160 1630 aa16.29■□□□□ 0.2
AP000708.1-201ENST00000527818 DIEXFQ68CQ4 756 aaKnown RBP16.27■□□□□ 0.19
AP000708.1-201ENST00000527818 MYT1Q01538 1121 aa16.22■□□□□ 0.19
AP000708.1-201ENST00000527818 CCER1Q8TC90 406 aaPredicted RBP16.22■□□□□ 0.19
AP000708.1-201ENST00000527818 CENPBP07199 599 aaPredicted RBP16.16■□□□□ 0.18
AP000708.1-201ENST00000527818 EIF4G1Q04637 1599 aaKnown RBP16.13■□□□□ 0.17
AP000708.1-201ENST00000527818 CECR2Q9BXF3 1484 aa16.06■□□□□ 0.16
AP000708.1-201ENST00000527818 SMARCA2P51531 1590 aa16.06■□□□□ 0.16
AP000708.1-201ENST00000527818 WIZO95785 1651 aa16.06■□□□□ 0.16
AP000708.1-201ENST00000527818 MROH2BQ7Z745 1585 aa16.05■□□□□ 0.16
AP000708.1-201ENST00000527818 TTBK1Q5TCY1 1321 aaPredicted RBP16.01■□□□□ 0.15
AP000708.1-201ENST00000527818 YTHDC1Q96MU7 727 aaKnown RBP16.01■□□□□ 0.15
AP000708.1-201ENST00000527818 WRNQ14191 1432 aaPredicted RBP eCLIP16■□□□□ 0.15
AP000708.1-201ENST00000527818 PRDM2Q13029 1718 aa16■□□□□ 0.15
AP000708.1-201ENST00000527818 BAZ1AQ9NRL2 1556 aaPredicted RBP15.98■□□□□ 0.15
AP000708.1-201ENST00000527818 ZNF316A6NFI3 1004 aaPredicted RBP15.97■□□□□ 0.15
AP000708.1-201ENST00000527818 SMARCA4P51532 1647 aa15.95■□□□□ 0.14
AP000708.1-201ENST00000527818 MIER1Q8N108 512 aa15.95■□□□□ 0.14
AP000708.1-201ENST00000527818 CEP162Q5TB80 1403 aa15.91■□□□□ 0.14
AP000708.1-201ENST00000527818 ABCC8Q09428 1581 aa15.91■□□□□ 0.14
AP000708.1-201ENST00000527818 CCDC88BA6NC98 1476 aa15.88■□□□□ 0.13
AP000708.1-201ENST00000527818 HMGXB3Q12766 1538 aa15.88■□□□□ 0.13
AP000708.1-201ENST00000527818 SOGA1O94964 1423 aa15.8■□□□□ 0.12
AP000708.1-201ENST00000527818 RUSC2Q8N2Y8 1516 aa15.78■□□□□ 0.12
AP000708.1-201ENST00000527818 TNIKQ9UKE5 1360 aa15.75■□□□□ 0.11
AP000708.1-201ENST00000527818 TOP2AP11388 1531 aaKnown RBP15.74■□□□□ 0.11
AP000708.1-201ENST00000527818 SUPT16HQ9Y5B9 1047 aaKnown RBP15.68■□□□□ 0.1
AP000708.1-201ENST00000527818 HNRNPUL2Q1KMD3 747 aaKnown RBP15.63■□□□□ 0.09
AP000708.1-201ENST00000527818 TSHZ2Q9NRE2 1034 aa15.62■□□□□ 0.09
AP000708.1-201ENST00000527818 GOLGA3Q08378 1498 aa15.57■□□□□ 0.08
AP000708.1-201ENST00000527818 CSRNP3Q8WYN3 585 aa15.55■□□□□ 0.08
AP000708.1-201ENST00000527818 NCAPD3P42695 1498 aa15.54■□□□□ 0.08
AP000708.1-201ENST00000527818 UBTFP17480 764 aaKnown RBP15.53■□□□□ 0.08
AP000708.1-201ENST00000527818 ANP32EQ9BTT0 268 aa15.53■□□□□ 0.08
AP000708.1-201ENST00000527818 EEA1Q15075 1411 aa15.52■□□□□ 0.08
AP000708.1-201ENST00000527818 BCL11AQ9H165 835 aa15.5■□□□□ 0.07
AP000708.1-201ENST00000527818 KIF21BO75037 1637 aa15.5■□□□□ 0.07
AP000708.1-201ENST00000527818 CLIP1P30622 1438 aa15.48■□□□□ 0.07
AP000708.1-201ENST00000527818 DHX57Q6P158 1386 aaKnown RBP15.46■□□□□ 0.07
AP000708.1-201ENST00000527818 VPS8Q8N3P4 1428 aa15.45■□□□□ 0.06
AP000708.1-201ENST00000527818 SYNJ1O43426 1573 aa15.45■□□□□ 0.06
AP000708.1-201ENST00000527818 CLSPNQ9HAW4 1339 aa15.44■□□□□ 0.06
AP000708.1-201ENST00000527818 KCNH8Q96L42 1107 aa15.44■□□□□ 0.06
AP000708.1-201ENST00000527818 CEP164Q9UPV0 1460 aa15.41■□□□□ 0.06
AP000708.1-201ENST00000527818 BIVM-ERCC5R4GMW8 1640 aa15.37■□□□□ 0.05
AP000708.1-201ENST00000527818 ATAD2BQ9ULI0 1458 aa15.37■□□□□ 0.05
AP000708.1-201ENST00000527818 RAPGEF2Q9Y4G8 1499 aa15.37■□□□□ 0.05
AP000708.1-201ENST00000527818 WDR97A6NE52 1622 aa15.35■□□□□ 0.05
AP000708.1-201ENST00000527818 BAZ1BQ9UIG0 1483 aaKnown RBP15.31■□□□□ 0.04
AP000708.1-201ENST00000527818 BCANQ96GW7 911 aa15.31■□□□□ 0.04
AP000708.1-201ENST00000527818 ARAP1Q96P48 1450 aa15.26■□□□□ 0.03
AP000708.1-201ENST00000527818 CUX2O14529 1486 aa15.24■□□□□ 0.03
AP000708.1-201ENST00000527818 RANGAP1P46060 587 aaPredicted RBP15.24■□□□□ 0.03
AP000708.1-201ENST00000527818 KANK4Q5T7N3 995 aaPredicted RBP15.24■□□□□ 0.03
AP000708.1-201ENST00000527818 MAPKBP1O60336 1514 aa15.24■□□□□ 0.03
AP000708.1-201ENST00000527818 CC2D2AQ9P2K1 1620 aa15.23■□□□□ 0.03
AP000708.1-201ENST00000527818 FKBP8Q14318 412 aa15.2■□□□□ 0.02
AP000708.1-201ENST00000527818 RRBP1Q9P2E9 1410 aaKnown RBP15.2■□□□□ 0.02
AP000708.1-201ENST00000527818 RBM19Q9Y4C8 960 aaKnown RBP15.2■□□□□ 0.02
AP000708.1-201ENST00000527818 MSH5O43196 834 aa15.19■□□□□ 0.02
AP000708.1-201ENST00000527818 LAMC3Q9Y6N6 1575 aa15.18■□□□□ 0.02
AP000708.1-201ENST00000527818 APLP2Q06481 763 aa15.15■□□□□ 0.02
AP000708.1-201ENST00000527818 PABPN1Q86U42 306 aaKnown RBP eCLIP15.14■□□□□ 0.01
AP000708.1-201ENST00000527818 ITGAEP38570 1179 aa15.12■□□□□ 0.01
AP000708.1-201ENST00000527818 TOP2BQ02880 1626 aa15.11■□□□□ 0.01
AP000708.1-201ENST00000527818 ERICH3Q5RHP9 1530 aa15.09■□□□□ 0.01
AP000708.1-201ENST00000527818 PRXQ9BXM0 1461 aa15.08■□□□□ 0
AP000708.1-201ENST00000527818 CFTRP13569 1480 aa15.08■□□□□ 0
AP000708.1-201ENST00000527818 RAB3GAP2Q9H2M9 1393 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms