RNA–Protein interactions for RNA: ENST00000250066.6

USP6-201, Transcript of ubiquitin specific peptidase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP6, Length 7,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-201ENST00000250066 PELP1Q8IZL8 1130 aaKnown RBP14.42□□□□□ -0.1
USP6-201ENST00000250066 DCAF8L2P0C7V8 631 aa14.13□□□□□ -0.15
USP6-201ENST00000250066 ERICH6Q7L0X2 663 aa13.87□□□□□ -0.19
USP6-201ENST00000250066 CCER1Q8TC90 406 aaPredicted RBP13.75□□□□□ -0.21
USP6-201ENST00000250066 MYT1Q01538 1121 aa13.55□□□□□ -0.24
USP6-201ENST00000250066 APLP2Q06481 763 aa13.39□□□□□ -0.27
USP6-201ENST00000250066 EHMT2Q96KQ7 1210 aa13.39□□□□□ -0.27
USP6-201ENST00000250066 SUPT5HO00267 1087 aaKnown RBP13.38□□□□□ -0.27
USP6-201ENST00000250066 CENPBP07199 599 aaPredicted RBP13.37□□□□□ -0.27
USP6-201ENST00000250066 YTHDC1Q96MU7 727 aaKnown RBP13.24□□□□□ -0.29
USP6-201ENST00000250066 NEFLP07196 543 aa13.23□□□□□ -0.29
USP6-201ENST00000250066 FAM9AQ8IZU1 332 aaPredicted RBP13.23□□□□□ -0.29
USP6-201ENST00000250066 DAXXQ9UER7 740 aaPredicted RBP13.16□□□□□ -0.3
USP6-201ENST00000250066 PCGF6Q9BYE7 350 aa13.04□□□□□ -0.32
USP6-201ENST00000250066 TTBK1Q5TCY1 1321 aaPredicted RBP13.01□□□□□ -0.33
USP6-201ENST00000250066 ZEB1P37275 1124 aaPredicted RBP12.93□□□□□ -0.34
USP6-201ENST00000250066 NISCHQ9Y2I1 1504 aa12.84□□□□□ -0.35
USP6-201ENST00000250066 SHROOM4Q9ULL8 1493 aa12.8□□□□□ -0.36
USP6-201ENST00000250066 RTL5Q5HYW3 569 aaPredicted RBP12.79□□□□□ -0.36
USP6-201ENST00000250066 ATP1B4Q9UN42 357 aaPredicted RBP12.79□□□□□ -0.36
USP6-201ENST00000250066 ZNF316A6NFI3 1004 aaPredicted RBP12.77□□□□□ -0.37
USP6-201ENST00000250066 RANGAP1P46060 587 aaPredicted RBP12.72□□□□□ -0.37
USP6-201ENST00000250066 CLSPNQ9HAW4 1339 aa12.64□□□□□ -0.39
USP6-201ENST00000250066 POLR3GLQ9BT43 218 aa12.56□□□□□ -0.4
USP6-201ENST00000250066 UBTFP17480 764 aaKnown RBP12.45□□□□□ -0.42
USP6-201ENST00000250066 SLC4A1APQ9BWU0 796 aaKnown RBP12.44□□□□□ -0.42
USP6-201ENST00000250066 CNGB1Q14028 1251 aaPredicted RBP12.44□□□□□ -0.42
USP6-201ENST00000250066 MYT1LQ9UL68 1186 aa12.44□□□□□ -0.42
USP6-201ENST00000250066 ZBTB47Q9UFB7 747 aaPredicted RBP12.36□□□□□ -0.43
USP6-201ENST00000250066 GLIPR1L2Q4G1C9 344 aa12.34□□□□□ -0.43
USP6-201ENST00000250066 TRIM41Q8WV44 630 aa12.34□□□□□ -0.43
USP6-201ENST00000250066 EIF5BO60841 1220 aaKnown RBP12.33□□□□□ -0.43
USP6-201ENST00000250066 CHIC1Q5VXU3 224 aa12.29□□□□□ -0.44
USP6-201ENST00000250066 ANP32BQ92688 251 aaKnown RBP12.25□□□□□ -0.45
USP6-201ENST00000250066 ITGAEP38570 1179 aa12.22□□□□□ -0.45
USP6-201ENST00000250066 PPARGC1BQ86YN6 1023 aaKnown RBP12.22□□□□□ -0.45
USP6-201ENST00000250066 CDK11AQ9UQ88 783 aaPredicted RBP12.21□□□□□ -0.46
USP6-201ENST00000250066 HRCP23327 699 aa12.2□□□□□ -0.46
USP6-201ENST00000250066 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.18□□□□□ -0.46
USP6-201ENST00000250066 HNRNPUL2Q1KMD3 747 aaKnown RBP12.18□□□□□ -0.46
USP6-201ENST00000250066 BCL11AQ9H165 835 aa12.18□□□□□ -0.46
USP6-201ENST00000250066 SLC24A1O60721 1099 aa12.16□□□□□ -0.46
USP6-201ENST00000250066 TRIM26Q12899 539 aaPredicted RBP12.15□□□□□ -0.47
USP6-201ENST00000250066 ANP32AP39687 249 aaKnown RBP12.09□□□□□ -0.47
USP6-201ENST00000250066 CANXP27824 592 aaKnown RBP12.09□□□□□ -0.47
USP6-201ENST00000250066 BCANQ96GW7 911 aa12.08□□□□□ -0.48
USP6-201ENST00000250066 DIEXFQ68CQ4 756 aaKnown RBP12.06□□□□□ -0.48
USP6-201ENST00000250066 HSP90AA1P07900 732 aaKnown RBP12.06□□□□□ -0.48
USP6-201ENST00000250066 CDK11BP21127 795 aaKnown RBP12.01□□□□□ -0.49
USP6-201ENST00000250066 NEFMP07197 916 aa11.99□□□□□ -0.49
USP6-201ENST00000250066 NPM2Q86SE8 214 aaKnown RBP11.96□□□□□ -0.5
USP6-201ENST00000250066 GTF3C3Q9Y5Q9 886 aa11.94□□□□□ -0.5
USP6-201ENST00000250066 ANP32CO43423 234 aa11.93□□□□□ -0.5
USP6-201ENST00000250066 TNNT2P45379 298 aaPredicted RBP11.92□□□□□ -0.5
USP6-201ENST00000250066 UPF2Q9HAU5 1272 aaKnown RBP11.91□□□□□ -0.5
USP6-201ENST00000250066 ARXQ96QS3 562 aa11.85□□□□□ -0.51
USP6-201ENST00000250066 TRIM52Q96A61 297 aa11.83□□□□□ -0.52
USP6-201ENST00000250066 NEUROD1Q13562 356 aa11.81□□□□□ -0.52
USP6-201ENST00000250066 ZNF326Q5BKZ1 582 aaKnown RBP11.8□□□□□ -0.52
USP6-201ENST00000250066 FAM50AQ14320 339 aaKnown RBP11.79□□□□□ -0.52
USP6-201ENST00000250066 NBR1Q14596 966 aa11.77□□□□□ -0.52
USP6-201ENST00000250066 TRIM44Q96DX7 344 aaPredicted RBP11.74□□□□□ -0.53
USP6-201ENST00000250066 DNTTIP2Q5QJE6 756 aaKnown RBP11.65□□□□□ -0.54
USP6-201ENST00000250066 NCLP19338 710 aaKnown RBP11.63□□□□□ -0.55
USP6-201ENST00000250066 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.62□□□□□ -0.55
USP6-201ENST00000250066 ZRSR1Q15695 479 aaKnown RBP11.62□□□□□ -0.55
USP6-201ENST00000250066 ANP32EQ9BTT0 268 aa11.61□□□□□ -0.55
USP6-201ENST00000250066 FKBP8Q14318 412 aa11.6□□□□□ -0.55
USP6-201ENST00000250066 LOC105371045A0A1W2PR82 267 aa11.6□□□□□ -0.55
USP6-201ENST00000250066 PTMAP06454 111 aaKnown RBP11.6□□□□□ -0.55
USP6-201ENST00000250066 TULP1O00294 542 aaPredicted RBP11.59□□□□□ -0.55
USP6-201ENST00000250066 GOLGA6L22H0YM25 854 aa11.57□□□□□ -0.56
USP6-201ENST00000250066 ACIN1Q9UKV3 1341 aaKnown RBP11.56□□□□□ -0.56
USP6-201ENST00000250066 AMER1Q5JTC6 1135 aaPredicted RBP11.56□□□□□ -0.56
USP6-201ENST00000250066 CCDC136Q96JN2 1154 aa11.56□□□□□ -0.56
USP6-201ENST00000250066 MYH16Q9H6N6 1097 aa11.54□□□□□ -0.56
USP6-201ENST00000250066 BECN1Q14457 450 aa11.54□□□□□ -0.56
USP6-201ENST00000250066 NAP1L5Q96NT1 182 aaPredicted RBP11.53□□□□□ -0.56
USP6-201ENST00000250066 ERICH6BQ5W0A0 696 aa11.51□□□□□ -0.57
USP6-201ENST00000250066 NCBP3Q53F19 620 aaKnown RBP11.5□□□□□ -0.57
USP6-201ENST00000250066 HNRNPUQ00839 825 aaKnown RBP eCLIP11.49□□□□□ -0.57
USP6-201ENST00000250066 SALL2Q9Y467 1007 aaPredicted RBP11.48□□□□□ -0.57
USP6-201ENST00000250066 DDRGK1Q96HY6 314 aa11.47□□□□□ -0.57
USP6-201ENST00000250066 GOLGA6L6A8MZA4 724 aa11.46□□□□□ -0.58
USP6-201ENST00000250066 A0A0G2JS52 829 aa11.45□□□□□ -0.58
USP6-201ENST00000250066 ESF1Q9H501 851 aaKnown RBP11.45□□□□□ -0.58
USP6-201ENST00000250066 NRDCO43847 1150 aa11.44□□□□□ -0.58
USP6-201ENST00000250066 FAM9BQ8IZU0 186 aa11.44□□□□□ -0.58
USP6-201ENST00000250066 TPRNQ4KMQ1 711 aa11.43□□□□□ -0.58
USP6-201ENST00000250066 CHAF1AQ13111 956 aaPredicted RBP11.42□□□□□ -0.58
USP6-201ENST00000250066 STAG3Q9UJ98 1225 aa11.42□□□□□ -0.58
USP6-201ENST00000250066 PLCB2Q00722 1185 aa11.41□□□□□ -0.58
USP6-201ENST00000250066 TMC1Q8TDI8 760 aa11.41□□□□□ -0.58
USP6-201ENST00000250066 WDR43Q15061 677 aaKnown RBP eCLIP11.39□□□□□ -0.59
USP6-201ENST00000250066 SCAF1Q9H7N4 1312 aaKnown RBP11.38□□□□□ -0.59
USP6-201ENST00000250066 CASC1Q6TDU7 716 aa11.38□□□□□ -0.59
USP6-201ENST00000250066 L1TD1Q5T7N2 865 aaKnown RBP11.37□□□□□ -0.59
USP6-201ENST00000250066 RTN4Q9NQC3 1192 aaKnown RBP11.37□□□□□ -0.59
USP6-201ENST00000250066 TNNT3P45378 269 aaPredicted RBP11.35□□□□□ -0.59
USP6-201ENST00000250066 CHGAP10645 457 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms