RNA–Protein interactions for RNA: ENST00000509418.1

SMARCAD1-206, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2 BASIC

Gene SMARCAD1, Length 2,348 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-206ENST00000509418 AEBP2Q6ZN18 517 aaPredicted RBP10.39□□□□□ -0.75
SMARCAD1-206ENST00000509418 CHIC1Q5VXU3 224 aa9.93□□□□□ -0.82
SMARCAD1-206ENST00000509418 SENP3Q9H4L4 574 aaPredicted RBP8.94□□□□□ -0.98
SMARCAD1-206ENST00000509418 POTEDQ86YR6 584 aa8.82□□□□□ -1
SMARCAD1-206ENST00000509418 PHF23Q9BUL5 403 aaPredicted RBP8.75□□□□□ -1.01
SMARCAD1-206ENST00000509418 FOXD1Q16676 465 aa8.34□□□□□ -1.08
SMARCAD1-206ENST00000509418 PLPPR3Q6T4P5 718 aa8.01□□□□□ -1.13
SMARCAD1-206ENST00000509418 MSH5O43196 834 aa7.85□□□□□ -1.15
SMARCAD1-206ENST00000509418 PIAS4Q8N2W9 510 aaPredicted RBP7.77□□□□□ -1.17
SMARCAD1-206ENST00000509418 PPP6R1Q9UPN7 881 aa7.62□□□□□ -1.19
SMARCAD1-206ENST00000509418 ADRA2BP18089 450 aa7.61□□□□□ -1.19
SMARCAD1-206ENST00000509418 SCAF1Q9H7N4 1312 aaKnown RBP7.22□□□□□ -1.25
SMARCAD1-206ENST00000509418 CACNB1Q02641 598 aaPredicted RBP7.13□□□□□ -1.27
SMARCAD1-206ENST00000509418 MAPK8IP2Q13387 824 aaPredicted RBP7.08□□□□□ -1.28
SMARCAD1-206ENST00000509418 DMRT2Q9Y5R5 561 aa7.07□□□□□ -1.28
SMARCAD1-206ENST00000509418 PPP4R3CPQ6ZMV5 832 aa6.96□□□□□ -1.29
SMARCAD1-206ENST00000509418 CNKSR2Q8WXI2 1034 aa6.89□□□□□ -1.31
SMARCAD1-206ENST00000509418 DCAF8L1A6NGE4 600 aa6.88□□□□□ -1.31
SMARCAD1-206ENST00000509418 NCBP3Q53F19 620 aaKnown RBP6.85□□□□□ -1.31
SMARCAD1-206ENST00000509418 HOXD11P31277 338 aaPredicted RBP6.84□□□□□ -1.31
SMARCAD1-206ENST00000509418 RNF216Q9NWF9 866 aaPredicted RBP6.82□□□□□ -1.32
SMARCAD1-206ENST00000509418 POTEHQ6S545 545 aa6.77□□□□□ -1.33
SMARCAD1-206ENST00000509418 DNAJC5BQ9UF47 199 aa6.76□□□□□ -1.33
SMARCAD1-206ENST00000509418 RNF39Q9H2S5 420 aa6.68□□□□□ -1.34
SMARCAD1-206ENST00000509418 NPM3O75607 178 aaKnown RBP6.58□□□□□ -1.36
SMARCAD1-206ENST00000509418 C1QBPQ07021 282 aaKnown RBP6.58□□□□□ -1.36
SMARCAD1-206ENST00000509418 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.49□□□□□ -1.37
SMARCAD1-206ENST00000509418 KCNA4P22459 653 aa6.43□□□□□ -1.38
SMARCAD1-206ENST00000509418 APLP2Q06481 763 aa6.41□□□□□ -1.38
SMARCAD1-206ENST00000509418 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.34□□□□□ -1.39
SMARCAD1-206ENST00000509418 HNRNPUL2Q1KMD3 747 aaKnown RBP6.34□□□□□ -1.39
SMARCAD1-206ENST00000509418 EHMT2Q96KQ7 1210 aa6.3□□□□□ -1.4
SMARCAD1-206ENST00000509418 U3KPZ7 1027 aaPredicted RBP6.3□□□□□ -1.4
SMARCAD1-206ENST00000509418 SAMD1Q6SPF0 538 aaPredicted RBP6.26□□□□□ -1.41
SMARCAD1-206ENST00000509418 CAPN15O75808 1086 aa6.25□□□□□ -1.41
SMARCAD1-206ENST00000509418 SLC4A2P04920 1241 aa6.23□□□□□ -1.41
SMARCAD1-206ENST00000509418 SPINK5Q9NQ38 1064 aaPredicted RBP6.23□□□□□ -1.41
SMARCAD1-206ENST00000509418 ZNF219Q9P2Y4 722 aaPredicted RBP6.21□□□□□ -1.41
SMARCAD1-206ENST00000509418 DSG3P32926 999 aa6.2□□□□□ -1.42
SMARCAD1-206ENST00000509418 MYCNP04198 464 aaPredicted RBP6.19□□□□□ -1.42
SMARCAD1-206ENST00000509418 SLC24A1O60721 1099 aa6.19□□□□□ -1.42
SMARCAD1-206ENST00000509418 SLC4A1APQ9BWU0 796 aaKnown RBP6.17□□□□□ -1.42
SMARCAD1-206ENST00000509418 FOXD4L1Q9NU39 408 aa6.11□□□□□ -1.43
SMARCAD1-206ENST00000509418 ABCB7O75027 752 aa6.11□□□□□ -1.43
SMARCAD1-206ENST00000509418 TRHP20396 242 aaPredicted RBP6.1□□□□□ -1.43
SMARCAD1-206ENST00000509418 ATXN8OSP0DMR3 200 aa6.03□□□□□ -1.44
SMARCAD1-206ENST00000509418 ZBTB12Q9Y330 459 aaPredicted RBP6.03□□□□□ -1.44
SMARCAD1-206ENST00000509418 RBM42Q9BTD8 480 aaKnown RBP6.03□□□□□ -1.44
SMARCAD1-206ENST00000509418 SP7Q8TDD2 431 aaPredicted RBP6.01□□□□□ -1.45
SMARCAD1-206ENST00000509418 POLA2Q14181 598 aa5.94□□□□□ -1.46
SMARCAD1-206ENST00000509418 CHRDL2Q6WN34 429 aa5.92□□□□□ -1.46
SMARCAD1-206ENST00000509418 CSRNP3Q8WYN3 585 aa5.91□□□□□ -1.46
SMARCAD1-206ENST00000509418 PLSCR2Q9NRY7 297 aa5.9□□□□□ -1.46
SMARCAD1-206ENST00000509418 RTN4Q9NQC3 1192 aaKnown RBP5.86□□□□□ -1.47
SMARCAD1-206ENST00000509418 ZBTB22O15209 634 aa5.85□□□□□ -1.47
SMARCAD1-206ENST00000509418 AKT1S1Q96B36 256 aa5.85□□□□□ -1.47
SMARCAD1-206ENST00000509418 FBLN2P98095 1184 aa5.84□□□□□ -1.47
SMARCAD1-206ENST00000509418 ATF5Q9Y2D1 282 aaPredicted RBP5.83□□□□□ -1.48
SMARCAD1-206ENST00000509418 SPDYE2BA6NHP3 402 aa5.77□□□□□ -1.49
SMARCAD1-206ENST00000509418 SPDYE6P0CI01 402 aa5.77□□□□□ -1.49
SMARCAD1-206ENST00000509418 SPDYE2Q495Y8 402 aa5.77□□□□□ -1.49
SMARCAD1-206ENST00000509418 HAX1O00165 279 aa5.74□□□□□ -1.49
SMARCAD1-206ENST00000509418 OSCARQ8IYS5 282 aa5.71□□□□□ -1.49
SMARCAD1-206ENST00000509418 REM2Q8IYK8 340 aaPredicted RBP5.71□□□□□ -1.5
SMARCAD1-206ENST00000509418 PIP4P2Q8N4L2 257 aa5.71□□□□□ -1.5
SMARCAD1-206ENST00000509418 AMER1Q5JTC6 1135 aaPredicted RBP5.7□□□□□ -1.5
SMARCAD1-206ENST00000509418 SPDYE1Q8NFV5 336 aaPredicted RBP5.66□□□□□ -1.5
SMARCAD1-206ENST00000509418 SSUH2Q9Y2M2 353 aa5.65□□□□□ -1.51
SMARCAD1-206ENST00000509418 PITPNM1O00562 1244 aa5.64□□□□□ -1.51
SMARCAD1-206ENST00000509418 LHX8Q68G74 356 aa5.64□□□□□ -1.51
SMARCAD1-206ENST00000509418 ZNF692Q9BU19 519 aaPredicted RBP5.64□□□□□ -1.51
SMARCAD1-206ENST00000509418 EVX2Q03828 476 aa5.63□□□□□ -1.51
SMARCAD1-206ENST00000509418 FXR2P51116 673 aaKnown RBP eCLIP5.62□□□□□ -1.51
SMARCAD1-206ENST00000509418 MKRN4PQ13434 485 aaPredicted RBP5.62□□□□□ -1.51
SMARCAD1-206ENST00000509418 STAG3Q9UJ98 1225 aa5.56□□□□□ -1.52
SMARCAD1-206ENST00000509418 CLEC11AQ9Y240 323 aa5.53□□□□□ -1.52
SMARCAD1-206ENST00000509418 PABPN1Q86U42 306 aaKnown RBP eCLIP5.52□□□□□ -1.53
SMARCAD1-206ENST00000509418 PRKAR2AP13861 404 aaKnown RBP5.52□□□□□ -1.53
SMARCAD1-206ENST00000509418 PRR29P0C7W0 189 aa5.51□□□□□ -1.53
SMARCAD1-206ENST00000509418 CLCN6P51797 869 aa5.49□□□□□ -1.53
SMARCAD1-206ENST00000509418 PRKCSHP14314 528 aaPredicted RBP5.49□□□□□ -1.53
SMARCAD1-206ENST00000509418 SPDYE4A6NLX3 237 aa5.46□□□□□ -1.54
SMARCAD1-206ENST00000509418 GABBR2O75899 941 aa5.45□□□□□ -1.54
SMARCAD1-206ENST00000509418 CHADLQ6NUI6 762 aa5.45□□□□□ -1.54
SMARCAD1-206ENST00000509418 C19orf67A6NJJ6 358 aa5.44□□□□□ -1.54
SMARCAD1-206ENST00000509418 NPM1P06748 294 aaKnown RBP eCLIP5.38□□□□□ -1.55
SMARCAD1-206ENST00000509418 FARP1Q9Y4F1 1045 aaPredicted RBP5.38□□□□□ -1.55
SMARCAD1-206ENST00000509418 PROM2Q8N271 834 aa5.37□□□□□ -1.55
SMARCAD1-206ENST00000509418 PAK3O75914 559 aaPredicted RBP5.35□□□□□ -1.55
SMARCAD1-206ENST00000509418 PLEKHG5O94827 1062 aa5.35□□□□□ -1.55
SMARCAD1-206ENST00000509418 POTEMA6NI47 508 aa5.34□□□□□ -1.55
SMARCAD1-206ENST00000509418 POTEIP0CG38 1075 aa5.33□□□□□ -1.56
SMARCAD1-206ENST00000509418 CREBZFQ9NS37 354 aa5.33□□□□□ -1.56
SMARCAD1-206ENST00000509418 DAXXQ9UER7 740 aaPredicted RBP5.33□□□□□ -1.56
SMARCAD1-206ENST00000509418 CD44P16070 742 aaKnown RBP5.32□□□□□ -1.56
SMARCAD1-206ENST00000509418 PCDH10Q9P2E7 1040 aa5.32□□□□□ -1.56
SMARCAD1-206ENST00000509418 TAOK2Q9UL54 1235 aa5.31□□□□□ -1.56
SMARCAD1-206ENST00000509418 FKBP8Q14318 412 aa5.31□□□□□ -1.56
SMARCAD1-206ENST00000509418 ZNF579Q8NAF0 562 aaKnown RBP5.3□□□□□ -1.56
SMARCAD1-206ENST00000509418 POTEGQ6S5H5 508 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms