Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 LRRC4C-202ENST00000527150 3085 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 SLFN13-210ENST00000534689 3058 ntTSL 2 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 MX1-201ENST00000288383 2733 ntTSL 2 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 SAMD7-201ENST00000335556 2376 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 CES5A-202ENST00000319165 2016 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 NBPF25P-201ENST00000606775 2019 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 USP17L26-202ENST00000610514 1677 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 USP17L20-202ENST00000613757 1677 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 USP17L11-202ENST00000613973 1677 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 USP17L17-202ENST00000614762 1677 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 USP17L19-202ENST00000615989 1677 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 USP17L13-202ENST00000616303 1677 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 USP17L18-202ENST00000619296 1677 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 USP17L21-202ENST00000621388 1677 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 USP17L25-202ENST00000621472 1677 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 USP17L22-202ENST00000622009 1677 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 USP17L24-202ENST00000622713 1677 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 NOL8-229ENST00000545558 4343 ntAPPRIS P3 TSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 ADAMTSL1-201ENST00000276935 2906 ntTSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 ABCC11-203ENST00000394747 4862 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 SRGAP2-203ENST00000573034 6301 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 SNHG14-210ENST00000546682 8842 ntTSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 ARHGAP19-SLIT1-202ENST00000479633 1876 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 CYP4B1-214ENST00000614163 1534 ntTSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 GREB1-202ENST00000263834 2448 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 ZNF267-201ENST00000300870 3317 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AL133412.1-201ENST00000380194 2992 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 LINC01498-201ENST00000502160 2984 ntTSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 HLF-208ENST00000573945 2977 ntTSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 CLDN18-201ENST00000183605 3520 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 PLCH1-204ENST00000460012 6413 ntAPPRIS P3 TSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 TRIM39-203ENST00000396547 3187 ntAPPRIS P4 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 SLC22A8-203ENST00000430500 1744 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 TP63-212ENST00000456148 1749 ntAPPRIS ALT1 TSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 ANAPC1-201ENST00000341068 8262 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 PRSS51-203ENST00000636217 2255 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 SMAD9-203ENST00000399275 5389 ntAPPRIS ALT1 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 AP002364.1-201ENST00000623330 3386 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 HAUS2-201ENST00000260372 3949 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 MOV10L1-209ENST00000540615 3941 ntAPPRIS ALT2 TSL 2 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 MICALCL-201ENST00000256186 3044 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 NRP1-212ENST00000432372 4137 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 ALOX12P2-210ENST00000574727 4326 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 AP001528.3-201ENST00000624364 3249 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 AC009541.1-201ENST00000438279 2662 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 CD22-205ENST00000544992 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 GIT2-216ENST00000551209 2127 ntTSL 5 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 CSF1R-201ENST00000286301 3989 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 SZRD1-202ENST00000401089 3447 ntTSL 2 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 RNF2-202ENST00000367510 3606 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 CKAP2-203ENST00000378037 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 SMC1B-202ENST00000404354 3636 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 AP3M1-202ENST00000372745 2320 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 ACSL6-206ENST00000379255 2301 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 PSG6-209ENST00000601833 2321 ntTSL 5 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 ERBB3-203ENST00000415288 4353 ntTSL 2 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 YY1AP1-203ENST00000347088 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 ACSL5-205ENST00000433418 3281 ntTSL 5 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 AL353795.3-201ENST00000624351 5702 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 OPTN-204ENST00000378752 3488 ntAPPRIS ALT1 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 LINC00909-202ENST00000580048 3463 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 LINC01692-201ENST00000441009 2719 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 ZFP57-202ENST00000376883 1980 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 ZNF169-202ENST00000395395 1986 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 SF3B2-201ENST00000322535 2903 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 B4GALT6-202ENST00000306851 3891 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 LINC00857-201ENST00000422847 2161 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 AC004453.2-201ENST00000624861 2153 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 ANAPC16-204ENST00000615507 3100 ntTSL 3 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 LINC00547-201ENST00000612438 3314 ntTSL 2 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 AL008638.6-201ENST00000623947 4254 ntBASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 ARHGEF9-201ENST00000253401 5413 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 IL1R1-203ENST00000409589 3544 ntTSL 5 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 ZBTB20-203ENST00000462705 3740 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 FHL2-207ENST00000409177 4881 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 NUMB-205ENST00000544991 2757 ntTSL 5 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 TSC1-208ENST00000545250 8310 ntTSL 5 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 MAGT1-205ENST00000618282 2788 ntAPPRIS ALT1 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 KANK1-205ENST00000382297 5051 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 RPS6KA5-202ENST00000536315 2993 ntTSL 2 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 NBPF3-213ENST00000619554 1831 ntAPPRIS ALT2 TSL 2 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 HAVCR1-206ENST00000625904 1807 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 NAA16-201ENST00000379406 4347 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 PAN2-201ENST00000257931 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 NUP85-211ENST00000579324 2010 ntTSL 2 BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 SLC7A3-202ENST00000374299 2236 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-4Q9BYR3 RAD54L2-201ENST00000409535 9776 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms