RNA–Protein interactions for RNA: ENST00000253401.10

ARHGEF9-201, Transcript of Cdc42 guanine nucleotide exchange factor 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF9, Length 5,413 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9-201ENST00000253401 DCAF8L2P0C7V8 631 aa16.45■□□□□ 0.22
ARHGEF9-201ENST00000253401 NISCHQ9Y2I1 1504 aa16.32■□□□□ 0.2
ARHGEF9-201ENST00000253401 SHROOM4Q9ULL8 1493 aa15□□□□□ -0.01
ARHGEF9-201ENST00000253401 SUPT5HO00267 1087 aaKnown RBP14.93□□□□□ -0.02
ARHGEF9-201ENST00000253401 EHMT2Q96KQ7 1210 aa14.46□□□□□ -0.1
ARHGEF9-201ENST00000253401 ABCC9O60706 1549 aa14.38□□□□□ -0.11
ARHGEF9-201ENST00000253401 FAM9AQ8IZU1 332 aaPredicted RBP14.33□□□□□ -0.11
ARHGEF9-201ENST00000253401 PABPN1Q86U42 306 aaKnown RBP eCLIP14.14□□□□□ -0.15
ARHGEF9-201ENST00000253401 APLP2Q06481 763 aa14.08□□□□□ -0.15
ARHGEF9-201ENST00000253401 RANGAP1P46060 587 aaPredicted RBP14.06□□□□□ -0.16
ARHGEF9-201ENST00000253401 ATP1B4Q9UN42 357 aaPredicted RBP13.97□□□□□ -0.17
ARHGEF9-201ENST00000253401 CCDC180Q9P1Z9 1646 aa13.88□□□□□ -0.19
ARHGEF9-201ENST00000253401 TRIM41Q8WV44 630 aa13.88□□□□□ -0.19
ARHGEF9-201ENST00000253401 TTBK1Q5TCY1 1321 aaPredicted RBP13.84□□□□□ -0.19
ARHGEF9-201ENST00000253401 UBTFP17480 764 aaKnown RBP13.76□□□□□ -0.21
ARHGEF9-201ENST00000253401 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.67□□□□□ -0.22
ARHGEF9-201ENST00000253401 HNRNPUL2Q1KMD3 747 aaKnown RBP13.67□□□□□ -0.22
ARHGEF9-201ENST00000253401 MYT1LQ9UL68 1186 aa13.67□□□□□ -0.22
ARHGEF9-201ENST00000253401 FBLN2P98095 1184 aa13.56□□□□□ -0.24
ARHGEF9-201ENST00000253401 ZCCHC6Q5VYS8 1495 aaKnown RBP13.53□□□□□ -0.24
ARHGEF9-201ENST00000253401 RB1CC1Q8TDY2 1594 aa13.46□□□□□ -0.25
ARHGEF9-201ENST00000253401 SCRIBQ14160 1630 aa13.43□□□□□ -0.26
ARHGEF9-201ENST00000253401 NACADO15069 1562 aa13.36□□□□□ -0.27
ARHGEF9-201ENST00000253401 CHIC1Q5VXU3 224 aa13.36□□□□□ -0.27
ARHGEF9-201ENST00000253401 PELP1Q8IZL8 1130 aaKnown RBP13.34□□□□□ -0.27
ARHGEF9-201ENST00000253401 PCGF6Q9BYE7 350 aa13.24□□□□□ -0.29
ARHGEF9-201ENST00000253401 PPARGC1BQ86YN6 1023 aaKnown RBP13.23□□□□□ -0.29
ARHGEF9-201ENST00000253401 ITGAEP38570 1179 aa13.23□□□□□ -0.29
ARHGEF9-201ENST00000253401 MYT1Q01538 1121 aa13.18□□□□□ -0.3
ARHGEF9-201ENST00000253401 DCAF1Q9Y4B6 1507 aa13.13□□□□□ -0.31
ARHGEF9-201ENST00000253401 NPM1P06748 294 aaKnown RBP eCLIP13.1□□□□□ -0.31
ARHGEF9-201ENST00000253401 ARID3CA6NKF2 412 aa13.1□□□□□ -0.31
ARHGEF9-201ENST00000253401 CCER1Q8TC90 406 aaPredicted RBP13.09□□□□□ -0.31
ARHGEF9-201ENST00000253401 ERCC6Q03468 1493 aa13.04□□□□□ -0.32
ARHGEF9-201ENST00000253401 P3H3Q8IVL6 736 aa13.04□□□□□ -0.32
ARHGEF9-201ENST00000253401 LOC105371045A0A1W2PR82 267 aa13□□□□□ -0.33
ARHGEF9-201ENST00000253401 ERICH6Q7L0X2 663 aa13□□□□□ -0.33
ARHGEF9-201ENST00000253401 CHMP7Q8WUX9 453 aaPredicted RBP13□□□□□ -0.33
ARHGEF9-201ENST00000253401 PLPPR3Q6T4P5 718 aa12.98□□□□□ -0.33
ARHGEF9-201ENST00000253401 FAM50AQ14320 339 aaKnown RBP12.98□□□□□ -0.33
ARHGEF9-201ENST00000253401 MYO15BQ96JP2 1530 aa12.96□□□□□ -0.33
ARHGEF9-201ENST00000253401 ESF1Q9H501 851 aaKnown RBP12.95□□□□□ -0.34
ARHGEF9-201ENST00000253401 POLR3GLQ9BT43 218 aa12.95□□□□□ -0.34
ARHGEF9-201ENST00000253401 SLC4A1APQ9BWU0 796 aaKnown RBP12.92□□□□□ -0.34
ARHGEF9-201ENST00000253401 BCANQ96GW7 911 aa12.92□□□□□ -0.34
ARHGEF9-201ENST00000253401 ZNF777Q9ULD5 760 aaPredicted RBP12.89□□□□□ -0.35
ARHGEF9-201ENST00000253401 TRIM52Q96A61 297 aa12.89□□□□□ -0.35
ARHGEF9-201ENST00000253401 BAZ1BQ9UIG0 1483 aaKnown RBP12.89□□□□□ -0.35
ARHGEF9-201ENST00000253401 CDK11AQ9UQ88 783 aaPredicted RBP12.86□□□□□ -0.35
ARHGEF9-201ENST00000253401 CSRNP3Q8WYN3 585 aa12.82□□□□□ -0.36
ARHGEF9-201ENST00000253401 TRHP20396 242 aaPredicted RBP12.8□□□□□ -0.36
ARHGEF9-201ENST00000253401 BAZ1AQ9NRL2 1556 aaPredicted RBP12.79□□□□□ -0.36
ARHGEF9-201ENST00000253401 RSF1Q96T23 1441 aaPredicted RBP12.78□□□□□ -0.36
ARHGEF9-201ENST00000253401 CENPBP07199 599 aaPredicted RBP12.78□□□□□ -0.36
ARHGEF9-201ENST00000253401 CECR2Q9BXF3 1484 aa12.77□□□□□ -0.37
ARHGEF9-201ENST00000253401 CNGB1Q14028 1251 aaPredicted RBP12.76□□□□□ -0.37
ARHGEF9-201ENST00000253401 ZEB1P37275 1124 aaPredicted RBP12.74□□□□□ -0.37
ARHGEF9-201ENST00000253401 STAG3Q9UJ98 1225 aa12.73□□□□□ -0.37
ARHGEF9-201ENST00000253401 KCNH8Q96L42 1107 aa12.7□□□□□ -0.38
ARHGEF9-201ENST00000253401 TRIM26Q12899 539 aaPredicted RBP12.68□□□□□ -0.38
ARHGEF9-201ENST00000253401 ZNF326Q5BKZ1 582 aaKnown RBP12.68□□□□□ -0.38
ARHGEF9-201ENST00000253401 CHGAP10645 457 aaKnown RBP12.66□□□□□ -0.38
ARHGEF9-201ENST00000253401 ARID4BQ4LE39 1312 aaPredicted RBP12.64□□□□□ -0.39
ARHGEF9-201ENST00000253401 SMARCA2P51531 1590 aa12.63□□□□□ -0.39
ARHGEF9-201ENST00000253401 NEUROD1Q13562 356 aa12.61□□□□□ -0.39
ARHGEF9-201ENST00000253401 MROH2BQ7Z745 1585 aa12.6□□□□□ -0.39
ARHGEF9-201ENST00000253401 PDS5BQ9NTI5 1447 aa12.6□□□□□ -0.39
ARHGEF9-201ENST00000253401 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.56□□□□□ -0.4
ARHGEF9-201ENST00000253401 YTHDC1Q96MU7 727 aaKnown RBP12.56□□□□□ -0.4
ARHGEF9-201ENST00000253401 PLEKHD1A6NEE1 506 aa12.54□□□□□ -0.4
ARHGEF9-201ENST00000253401 TSPY4P0CV99 314 aa12.52□□□□□ -0.41
ARHGEF9-201ENST00000253401 TSPY10P0CW01 314 aa12.52□□□□□ -0.41
ARHGEF9-201ENST00000253401 WRNQ14191 1432 aaPredicted RBP eCLIP12.51□□□□□ -0.41
ARHGEF9-201ENST00000253401 ATAD2BQ9ULI0 1458 aa12.5□□□□□ -0.41
ARHGEF9-201ENST00000253401 CHIC2Q9UKJ5 165 aa12.48□□□□□ -0.41
ARHGEF9-201ENST00000253401 SLC24A1O60721 1099 aa12.47□□□□□ -0.41
ARHGEF9-201ENST00000253401 MTUS2Q5JR59 1369 aa12.47□□□□□ -0.41
ARHGEF9-201ENST00000253401 KIF27Q86VH2 1401 aa12.47□□□□□ -0.41
ARHGEF9-201ENST00000253401 SMARCA4P51532 1647 aa12.47□□□□□ -0.41
ARHGEF9-201ENST00000253401 EIF4G1Q04637 1599 aaKnown RBP12.44□□□□□ -0.42
ARHGEF9-201ENST00000253401 SENP3Q9H4L4 574 aaPredicted RBP12.43□□□□□ -0.42
ARHGEF9-201ENST00000253401 SCAF1Q9H7N4 1312 aaKnown RBP12.43□□□□□ -0.42
ARHGEF9-201ENST00000253401 WIZO95785 1651 aa12.42□□□□□ -0.42
ARHGEF9-201ENST00000253401 CCDC88BA6NC98 1476 aa12.41□□□□□ -0.42
ARHGEF9-201ENST00000253401 C14orf37Q86TY3 774 aa12.41□□□□□ -0.42
ARHGEF9-201ENST00000253401 PPP1R15AO75807 674 aaPredicted RBP12.41□□□□□ -0.42
ARHGEF9-201ENST00000253401 NEFLP07196 543 aa12.41□□□□□ -0.42
ARHGEF9-201ENST00000253401 TOP2AP11388 1531 aaKnown RBP12.4□□□□□ -0.42
ARHGEF9-201ENST00000253401 CADPSQ9ULU8 1353 aa12.4□□□□□ -0.43
ARHGEF9-201ENST00000253401 CUX2O14529 1486 aa12.39□□□□□ -0.43
ARHGEF9-201ENST00000253401 TDRD9Q8NDG6 1382 aaKnown RBP12.38□□□□□ -0.43
ARHGEF9-201ENST00000253401 SOGA1O94964 1423 aa12.37□□□□□ -0.43
ARHGEF9-201ENST00000253401 MLECQ14165 292 aa12.37□□□□□ -0.43
ARHGEF9-201ENST00000253401 CEP164Q9UPV0 1460 aa12.35□□□□□ -0.43
ARHGEF9-201ENST00000253401 OSCARQ8IYS5 282 aa12.34□□□□□ -0.43
ARHGEF9-201ENST00000253401 NCAPD3P42695 1498 aa12.34□□□□□ -0.43
ARHGEF9-201ENST00000253401 CYB5RLQ6IPT4 315 aa12.33□□□□□ -0.43
ARHGEF9-201ENST00000253401 PLEKHG5O94827 1062 aa12.33□□□□□ -0.44
ARHGEF9-201ENST00000253401 CFDP1Q9UEE9 299 aaPredicted RBP12.33□□□□□ -0.44
ARHGEF9-201ENST00000253401 NEFMP07197 916 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms