Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
LRCH3Q96II8 AC024224.1-201ENST00000538284 609 ntBASIC7.62□□□□□ -1.19
LRCH3Q96II8 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC7.62□□□□□ -1.19
LRCH3Q96II8 AC008126.1-201ENST00000549019 480 ntBASIC7.62□□□□□ -1.19
LRCH3Q96II8 AC005519.1-201ENST00000554490 601 ntBASIC7.62□□□□□ -1.19
LRCH3Q96II8 MEG8-218ENST00000556720 456 ntTSL 3 BASIC7.62□□□□□ -1.19
LRCH3Q96II8 AL358334.3-201ENST00000557343 535 ntTSL 3 BASIC7.62□□□□□ -1.19
LRCH3Q96II8 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC7.62□□□□□ -1.19
LRCH3Q96II8 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC7.62□□□□□ -1.19
LRCH3Q96II8 AC012175.1-201ENST00000603755 531 ntBASIC7.62□□□□□ -1.19
LRCH3Q96II8 AP001521.1-201ENST00000609150 300 ntBASIC7.62□□□□□ -1.19
LRCH3Q96II8 MIR6826-201ENST00000617808 98 ntBASIC7.62□□□□□ -1.19
LRCH3Q96II8 CR392039.3-201ENST00000623236 227 ntTSL 5 BASIC7.62□□□□□ -1.19
LRCH3Q96II8 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
LRCH3Q96II8 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC7.62□□□□□ -1.19
LRCH3Q96II8 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC7.62□□□□□ -1.19
LRCH3Q96II8 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
LRCH3Q96II8 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
LRCH3Q96II8 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC7.62□□□□□ -1.19
LRCH3Q96II8 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC7.62□□□□□ -1.19
LRCH3Q96II8 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
LRCH3Q96II8 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
LRCH3Q96II8 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
LRCH3Q96II8 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
LRCH3Q96II8 LDAH-209ENST00000440866 3728 ntTSL 2 BASIC7.62□□□□□ -1.19
LRCH3Q96II8 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC7.62□□□□□ -1.19
LRCH3Q96II8 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
LRCH3Q96II8 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
LRCH3Q96II8 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC7.62□□□□□ -1.19
LRCH3Q96II8 AC104966.1-201ENST00000467010 1464 ntBASIC7.62□□□□□ -1.19
LRCH3Q96II8 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC7.62□□□□□ -1.19
LRCH3Q96II8 OFD1P5Y-201ENST00000447585 2590 ntBASIC7.62□□□□□ -1.19
LRCH3Q96II8 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
LRCH3Q96II8 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
LRCH3Q96II8 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
LRCH3Q96II8 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
LRCH3Q96II8 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC7.61□□□□□ -1.19
LRCH3Q96II8 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
LRCH3Q96II8 AL354854.1-201ENST00000455940 1363 ntBASIC7.61□□□□□ -1.19
LRCH3Q96II8 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
LRCH3Q96II8 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC7.61□□□□□ -1.19
LRCH3Q96II8 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
LRCH3Q96II8 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC7.61□□□□□ -1.19
LRCH3Q96II8 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
LRCH3Q96II8 Y_RNA.60-201ENST00000362831 98 ntBASIC7.61□□□□□ -1.19
LRCH3Q96II8 RNU6-770P-201ENST00000363929 105 ntBASIC7.61□□□□□ -1.19
LRCH3Q96II8 Y_RNA.389-201ENST00000383924 113 ntBASIC7.61□□□□□ -1.19
LRCH3Q96II8 AL445529.1-201ENST00000398713 389 ntBASIC7.61□□□□□ -1.19
LRCH3Q96II8 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
LRCH3Q96II8 PRELID1P2-201ENST00000407805 396 ntBASIC7.61□□□□□ -1.19
LRCH3Q96II8 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC7.61□□□□□ -1.19
LRCH3Q96II8 RPS3AP38-201ENST00000435889 763 ntBASIC7.61□□□□□ -1.19
LRCH3Q96II8 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC7.61□□□□□ -1.19
LRCH3Q96II8 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC7.61□□□□□ -1.19
LRCH3Q96II8 TXNP5-201ENST00000441043 315 ntBASIC7.61□□□□□ -1.19
LRCH3Q96II8 AC079781.2-201ENST00000446424 169 ntBASIC7.61□□□□□ -1.19
LRCH3Q96II8 HMGB1P15-201ENST00000453854 435 ntBASIC7.61□□□□□ -1.19
LRCH3Q96II8 PSMC1P13-201ENST00000458195 985 ntBASIC7.61□□□□□ -1.19
LRCH3Q96II8 RN7SL413P-201ENST00000482700 297 ntBASIC7.61□□□□□ -1.19
LRCH3Q96II8 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC7.61□□□□□ -1.19
LRCH3Q96II8 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC7.61□□□□□ -1.19
LRCH3Q96II8 SCARNA20.1-201ENST00000516009 138 ntBASIC7.61□□□□□ -1.19
LRCH3Q96II8 RNU6-410P-201ENST00000517006 107 ntBASIC7.61□□□□□ -1.19
LRCH3Q96II8 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC7.61□□□□□ -1.19
LRCH3Q96II8 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC7.61□□□□□ -1.19
LRCH3Q96II8 OR8R1P-201ENST00000543943 764 ntBASIC7.61□□□□□ -1.19
LRCH3Q96II8 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC7.61□□□□□ -1.19
LRCH3Q96II8 RPL3P13-201ENST00000550415 216 ntBASIC7.61□□□□□ -1.19
LRCH3Q96II8 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC7.61□□□□□ -1.19
LRCH3Q96II8 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC7.61□□□□□ -1.19
LRCH3Q96II8 MIR3128-201ENST00000581957 66 ntBASIC7.61□□□□□ -1.19
LRCH3Q96II8 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC7.61□□□□□ -1.19
LRCH3Q96II8 AC063962.1-201ENST00000608199 521 ntBASIC7.61□□□□□ -1.19
LRCH3Q96II8 SNORD91A-202ENST00000609620 191 ntBASIC7.61□□□□□ -1.19
LRCH3Q96II8 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC7.61□□□□□ -1.19
LRCH3Q96II8 AC098657.3-201ENST00000620434 263 ntBASIC7.61□□□□□ -1.19
LRCH3Q96II8 MIR8062-201ENST00000621515 85 ntBASIC7.61□□□□□ -1.19
LRCH3Q96II8 PLCE1P1-201ENST00000622094 305 ntBASIC7.61□□□□□ -1.19
LRCH3Q96II8 MIR6719-201ENST00000622428 87 ntBASIC7.61□□□□□ -1.19
LRCH3Q96II8 BANCR-201ENST00000624238 473 ntTSL 2 BASIC7.61□□□□□ -1.19
LRCH3Q96II8 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC7.61□□□□□ -1.19
LRCH3Q96II8 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC7.61□□□□□ -1.19
LRCH3Q96II8 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC7.61□□□□□ -1.19
LRCH3Q96II8 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC7.61□□□□□ -1.19
LRCH3Q96II8 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC7.61□□□□□ -1.19
LRCH3Q96II8 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC7.61□□□□□ -1.19
LRCH3Q96II8 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
LRCH3Q96II8 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
LRCH3Q96II8 AC009831.5-201ENST00000624000 3189 ntBASIC7.61□□□□□ -1.19
LRCH3Q96II8 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
LRCH3Q96II8 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LRCH3Q96II8 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LRCH3Q96II8 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LRCH3Q96II8 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LRCH3Q96II8 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC7.6□□□□□ -1.19
LRCH3Q96II8 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
LRCH3Q96II8 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LRCH3Q96II8 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
LRCH3Q96II8 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
LRCH3Q96II8 RNU6-472P-201ENST00000384299 107 ntBASIC7.6□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms