RNA–Protein interactions for RNA: ENST00000455940.1

AL354854.1-201, humanhuman

BASIC

Gene AL354854.1, Length 1,363 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL354854.1-201ENST00000455940 AEBP2Q6ZN18 517 aaPredicted RBP19.03■□□□□ 0.64
AL354854.1-201ENST00000455940 CHIC1Q5VXU3 224 aa18.11■□□□□ 0.49
AL354854.1-201ENST00000455940 SENP3Q9H4L4 574 aaPredicted RBP16.34■□□□□ 0.21
AL354854.1-201ENST00000455940 PHF23Q9BUL5 403 aaPredicted RBP16.07■□□□□ 0.16
AL354854.1-201ENST00000455940 NISCHQ9Y2I1 1504 aa15.37■□□□□ 0.05
AL354854.1-201ENST00000455940 FOXD1Q16676 465 aa15.16■□□□□ 0.02
AL354854.1-201ENST00000455940 PLPPR3Q6T4P5 718 aa14.5□□□□□ -0.09
AL354854.1-201ENST00000455940 MSH5O43196 834 aa14.29□□□□□ -0.12
AL354854.1-201ENST00000455940 PIAS4Q8N2W9 510 aaPredicted RBP14.22□□□□□ -0.13
AL354854.1-201ENST00000455940 PPP6R1Q9UPN7 881 aa14.11□□□□□ -0.15
AL354854.1-201ENST00000455940 ADRA2BP18089 450 aa14.09□□□□□ -0.15
AL354854.1-201ENST00000455940 POTEDQ86YR6 584 aa13.92□□□□□ -0.18
AL354854.1-201ENST00000455940 CCDC180Q9P1Z9 1646 aa13.74□□□□□ -0.21
AL354854.1-201ENST00000455940 ABCC9O60706 1549 aa13.64□□□□□ -0.23
AL354854.1-201ENST00000455940 SCAF1Q9H7N4 1312 aaKnown RBP13□□□□□ -0.33
AL354854.1-201ENST00000455940 RB1CC1Q8TDY2 1594 aa12.98□□□□□ -0.33
AL354854.1-201ENST00000455940 MAPK8IP2Q13387 824 aaPredicted RBP12.93□□□□□ -0.34
AL354854.1-201ENST00000455940 DMRT2Q9Y5R5 561 aa12.93□□□□□ -0.34
AL354854.1-201ENST00000455940 NACADO15069 1562 aa12.91□□□□□ -0.34
AL354854.1-201ENST00000455940 UNC13AQ9UPW8 1703 aa12.91□□□□□ -0.34
AL354854.1-201ENST00000455940 DCAF8L2P0C7V8 631 aa12.89□□□□□ -0.35
AL354854.1-201ENST00000455940 EHMT2Q96KQ7 1210 aa12.81□□□□□ -0.36
AL354854.1-201ENST00000455940 ZCCHC6Q5VYS8 1495 aaKnown RBP12.76□□□□□ -0.37
AL354854.1-201ENST00000455940 DNAJC5BQ9UF47 199 aa12.74□□□□□ -0.37
AL354854.1-201ENST00000455940 MYO15BQ96JP2 1530 aa12.74□□□□□ -0.37
AL354854.1-201ENST00000455940 KCNA4P22459 653 aa12.71□□□□□ -0.37
AL354854.1-201ENST00000455940 PABPN1Q86U42 306 aaKnown RBP eCLIP12.71□□□□□ -0.37
AL354854.1-201ENST00000455940 BICRAQ9NZM4 1560 aa12.71□□□□□ -0.38
AL354854.1-201ENST00000455940 PPP4R3CPQ6ZMV5 832 aa12.68□□□□□ -0.38
AL354854.1-201ENST00000455940 DCAF1Q9Y4B6 1507 aa12.65□□□□□ -0.38
AL354854.1-201ENST00000455940 SCRIBQ14160 1630 aa12.58□□□□□ -0.4
AL354854.1-201ENST00000455940 CNKSR2Q8WXI2 1034 aa12.47□□□□□ -0.41
AL354854.1-201ENST00000455940 HOXD11P31277 338 aaPredicted RBP12.43□□□□□ -0.42
AL354854.1-201ENST00000455940 DCAF8L1A6NGE4 600 aa12.42□□□□□ -0.42
AL354854.1-201ENST00000455940 SHROOM4Q9ULL8 1493 aa12.35□□□□□ -0.43
AL354854.1-201ENST00000455940 RNF216Q9NWF9 866 aaPredicted RBP12.35□□□□□ -0.43
AL354854.1-201ENST00000455940 CC2D2AQ9P2K1 1620 aa12.35□□□□□ -0.43
AL354854.1-201ENST00000455940 EIF4G1Q04637 1599 aaKnown RBP12.33□□□□□ -0.44
AL354854.1-201ENST00000455940 CSRNP3Q8WYN3 585 aa12.3□□□□□ -0.44
AL354854.1-201ENST00000455940 CACNB1Q02641 598 aaPredicted RBP12.25□□□□□ -0.45
AL354854.1-201ENST00000455940 NCBP3Q53F19 620 aaKnown RBP12.24□□□□□ -0.45
AL354854.1-201ENST00000455940 CECR2Q9BXF3 1484 aa12.22□□□□□ -0.45
AL354854.1-201ENST00000455940 SLC4A1APQ9BWU0 796 aaKnown RBP12.2□□□□□ -0.46
AL354854.1-201ENST00000455940 RNF39Q9H2S5 420 aa12.14□□□□□ -0.47
AL354854.1-201ENST00000455940 C1QBPQ07021 282 aaKnown RBP12□□□□□ -0.49
AL354854.1-201ENST00000455940 SMARCA4P51532 1647 aa12□□□□□ -0.49
AL354854.1-201ENST00000455940 NPM3O75607 178 aaKnown RBP11.99□□□□□ -0.49
AL354854.1-201ENST00000455940 ATAD2BQ9ULI0 1458 aa11.93□□□□□ -0.5
AL354854.1-201ENST00000455940 NCAPD3P42695 1498 aa11.92□□□□□ -0.5
AL354854.1-201ENST00000455940 MROH2BQ7Z745 1585 aa11.89□□□□□ -0.51
AL354854.1-201ENST00000455940 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.89□□□□□ -0.51
AL354854.1-201ENST00000455940 BAZ1AQ9NRL2 1556 aaPredicted RBP11.88□□□□□ -0.51
AL354854.1-201ENST00000455940 SMARCA2P51531 1590 aa11.87□□□□□ -0.51
AL354854.1-201ENST00000455940 HMGXB3Q12766 1538 aa11.85□□□□□ -0.51
AL354854.1-201ENST00000455940 PEG3Q9GZU2 1588 aa11.84□□□□□ -0.51
AL354854.1-201ENST00000455940 WIZO95785 1651 aa11.8□□□□□ -0.52
AL354854.1-201ENST00000455940 NESP48681 1621 aa11.8□□□□□ -0.52
AL354854.1-201ENST00000455940 BAZ1BQ9UIG0 1483 aaKnown RBP11.8□□□□□ -0.52
AL354854.1-201ENST00000455940 ZBTB22O15209 634 aa11.74□□□□□ -0.53
AL354854.1-201ENST00000455940 KIF21AQ7Z4S6 1674 aa11.7□□□□□ -0.54
AL354854.1-201ENST00000455940 ERCC6Q03468 1493 aa11.69□□□□□ -0.54
AL354854.1-201ENST00000455940 RSF1Q96T23 1441 aaPredicted RBP11.65□□□□□ -0.54
AL354854.1-201ENST00000455940 LAMC3Q9Y6N6 1575 aa11.64□□□□□ -0.55
AL354854.1-201ENST00000455940 SLC24A1O60721 1099 aa11.64□□□□□ -0.55
AL354854.1-201ENST00000455940 THOC2Q8NI27 1593 aaKnown RBP11.64□□□□□ -0.55
AL354854.1-201ENST00000455940 CUX2O14529 1486 aa11.61□□□□□ -0.55
AL354854.1-201ENST00000455940 U3KPZ7 1027 aaPredicted RBP11.58□□□□□ -0.56
AL354854.1-201ENST00000455940 TOP2AP11388 1531 aaKnown RBP11.56□□□□□ -0.56
AL354854.1-201ENST00000455940 CADPSQ9ULU8 1353 aa11.55□□□□□ -0.56
AL354854.1-201ENST00000455940 PDS5BQ9NTI5 1447 aa11.52□□□□□ -0.57
AL354854.1-201ENST00000455940 RTN4Q9NQC3 1192 aaKnown RBP11.5□□□□□ -0.57
AL354854.1-201ENST00000455940 PRDM2Q13029 1718 aa11.49□□□□□ -0.57
AL354854.1-201ENST00000455940 DNAJC5Q9H3Z4 198 aa11.49□□□□□ -0.57
AL354854.1-201ENST00000455940 CFTRP13569 1480 aa11.47□□□□□ -0.57
AL354854.1-201ENST00000455940 CCDC88BA6NC98 1476 aa11.45□□□□□ -0.58
AL354854.1-201ENST00000455940 FANCD2Q9BXW9 1451 aa11.45□□□□□ -0.58
AL354854.1-201ENST00000455940 MRC2Q9UBG0 1479 aa11.45□□□□□ -0.58
AL354854.1-201ENST00000455940 CAPN15O75808 1086 aa11.45□□□□□ -0.58
AL354854.1-201ENST00000455940 WDR62O43379 1518 aa11.45□□□□□ -0.58
AL354854.1-201ENST00000455940 CEP164Q9UPV0 1460 aa11.43□□□□□ -0.58
AL354854.1-201ENST00000455940 SLC4A2P04920 1241 aa11.42□□□□□ -0.58
AL354854.1-201ENST00000455940 AMER1Q5JTC6 1135 aaPredicted RBP11.41□□□□□ -0.58
AL354854.1-201ENST00000455940 SPINK5Q9NQ38 1064 aaPredicted RBP11.41□□□□□ -0.58
AL354854.1-201ENST00000455940 FOXD4L1Q9NU39 408 aa11.41□□□□□ -0.58
AL354854.1-201ENST00000455940 URB2Q14146 1524 aaKnown RBP11.4□□□□□ -0.58
AL354854.1-201ENST00000455940 APLP2Q06481 763 aa11.39□□□□□ -0.59
AL354854.1-201ENST00000455940 DSG3P32926 999 aa11.35□□□□□ -0.59
AL354854.1-201ENST00000455940 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.34□□□□□ -0.59
AL354854.1-201ENST00000455940 HNRNPUL2Q1KMD3 747 aaKnown RBP11.34□□□□□ -0.59
AL354854.1-201ENST00000455940 TOPBP1Q92547 1522 aa11.27□□□□□ -0.6
AL354854.1-201ENST00000455940 ZNF219Q9P2Y4 722 aaPredicted RBP11.27□□□□□ -0.61
AL354854.1-201ENST00000455940 SAMD1Q6SPF0 538 aaPredicted RBP11.26□□□□□ -0.61
AL354854.1-201ENST00000455940 ZNF608Q9ULD9 1512 aaPredicted RBP11.25□□□□□ -0.61
AL354854.1-201ENST00000455940 TRHP20396 242 aaPredicted RBP11.24□□□□□ -0.61
AL354854.1-201ENST00000455940 DNMBPQ6XZF7 1577 aa11.23□□□□□ -0.61
AL354854.1-201ENST00000455940 SUPT5HO00267 1087 aaKnown RBP11.23□□□□□ -0.61
AL354854.1-201ENST00000455940 TARBP1Q13395 1621 aaKnown RBP11.21□□□□□ -0.61
AL354854.1-201ENST00000455940 EIF4G3O43432 1585 aaKnown RBP11.18□□□□□ -0.62
AL354854.1-201ENST00000455940 IFT140Q96RY7 1462 aa11.17□□□□□ -0.62
AL354854.1-201ENST00000455940 CUX1P39880 1505 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms