RNA–Protein interactions for RNA: ENST00000355485.6

VANGL1-202, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 8,691 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-202ENST00000355485 DCAF8L2P0C7V8 631 aa12.82□□□□□ -0.36
VANGL1-202ENST00000355485 SUPT5HO00267 1087 aaKnown RBP12.74□□□□□ -0.37
VANGL1-202ENST00000355485 EHMT2Q96KQ7 1210 aa12.67□□□□□ -0.38
VANGL1-202ENST00000355485 PELP1Q8IZL8 1130 aaKnown RBP12.54□□□□□ -0.4
VANGL1-202ENST00000355485 PCGF6Q9BYE7 350 aa12.52□□□□□ -0.4
VANGL1-202ENST00000355485 FAM9AQ8IZU1 332 aaPredicted RBP12.48□□□□□ -0.41
VANGL1-202ENST00000355485 SHROOM4Q9ULL8 1493 aa12.42□□□□□ -0.42
VANGL1-202ENST00000355485 MYT1Q01538 1121 aa12.36□□□□□ -0.43
VANGL1-202ENST00000355485 ERICH6Q7L0X2 663 aa12.35□□□□□ -0.43
VANGL1-202ENST00000355485 NISCHQ9Y2I1 1504 aa12.32□□□□□ -0.44
VANGL1-202ENST00000355485 TTBK1Q5TCY1 1321 aaPredicted RBP12.3□□□□□ -0.44
VANGL1-202ENST00000355485 YTHDC1Q96MU7 727 aaKnown RBP12.27□□□□□ -0.45
VANGL1-202ENST00000355485 CENPBP07199 599 aaPredicted RBP12.26□□□□□ -0.45
VANGL1-202ENST00000355485 PPARGC1BQ86YN6 1023 aaKnown RBP12.11□□□□□ -0.47
VANGL1-202ENST00000355485 HRCP23327 699 aa12.04□□□□□ -0.48
VANGL1-202ENST00000355485 CCER1Q8TC90 406 aaPredicted RBP12.03□□□□□ -0.48
VANGL1-202ENST00000355485 ZEB1P37275 1124 aaPredicted RBP12□□□□□ -0.49
VANGL1-202ENST00000355485 APLP2Q06481 763 aa11.89□□□□□ -0.51
VANGL1-202ENST00000355485 NEFLP07196 543 aa11.82□□□□□ -0.52
VANGL1-202ENST00000355485 RANGAP1P46060 587 aaPredicted RBP11.79□□□□□ -0.52
VANGL1-202ENST00000355485 GTF3C3Q9Y5Q9 886 aa11.72□□□□□ -0.53
VANGL1-202ENST00000355485 TRIM26Q12899 539 aaPredicted RBP11.69□□□□□ -0.54
VANGL1-202ENST00000355485 BCANQ96GW7 911 aa11.62□□□□□ -0.55
VANGL1-202ENST00000355485 LOC105371045A0A1W2PR82 267 aa11.6□□□□□ -0.55
VANGL1-202ENST00000355485 TRIM41Q8WV44 630 aa11.58□□□□□ -0.56
VANGL1-202ENST00000355485 DIEXFQ68CQ4 756 aaKnown RBP11.55□□□□□ -0.56
VANGL1-202ENST00000355485 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.51□□□□□ -0.57
VANGL1-202ENST00000355485 ATP1B4Q9UN42 357 aaPredicted RBP11.49□□□□□ -0.57
VANGL1-202ENST00000355485 CNGB1Q14028 1251 aaPredicted RBP11.48□□□□□ -0.57
VANGL1-202ENST00000355485 DAXXQ9UER7 740 aaPredicted RBP11.47□□□□□ -0.57
VANGL1-202ENST00000355485 RTL5Q5HYW3 569 aaPredicted RBP11.46□□□□□ -0.57
VANGL1-202ENST00000355485 ACIN1Q9UKV3 1341 aaKnown RBP11.44□□□□□ -0.58
VANGL1-202ENST00000355485 MYT1LQ9UL68 1186 aa11.43□□□□□ -0.58
VANGL1-202ENST00000355485 UBTFP17480 764 aaKnown RBP11.43□□□□□ -0.58
VANGL1-202ENST00000355485 SCAF1Q9H7N4 1312 aaKnown RBP11.39□□□□□ -0.59
VANGL1-202ENST00000355485 HNRNPUL2Q1KMD3 747 aaKnown RBP11.39□□□□□ -0.59
VANGL1-202ENST00000355485 POLR3GLQ9BT43 218 aa11.37□□□□□ -0.59
VANGL1-202ENST00000355485 ITGAEP38570 1179 aa11.36□□□□□ -0.59
VANGL1-202ENST00000355485 EIF5BO60841 1220 aaKnown RBP11.33□□□□□ -0.6
VANGL1-202ENST00000355485 CHIC1Q5VXU3 224 aa11.31□□□□□ -0.6
VANGL1-202ENST00000355485 ZNF316A6NFI3 1004 aaPredicted RBP11.3□□□□□ -0.6
VANGL1-202ENST00000355485 NEUROD1Q13562 356 aa11.26□□□□□ -0.61
VANGL1-202ENST00000355485 CDK11AQ9UQ88 783 aaPredicted RBP11.23□□□□□ -0.61
VANGL1-202ENST00000355485 NBR1Q14596 966 aa11.15□□□□□ -0.62
VANGL1-202ENST00000355485 NPM2Q86SE8 214 aaKnown RBP11.15□□□□□ -0.62
VANGL1-202ENST00000355485 CLSPNQ9HAW4 1339 aa11.15□□□□□ -0.63
VANGL1-202ENST00000355485 FKBP8Q14318 412 aa11.12□□□□□ -0.63
VANGL1-202ENST00000355485 SLC4A1APQ9BWU0 796 aaKnown RBP11.11□□□□□ -0.63
VANGL1-202ENST00000355485 BCL11AQ9H165 835 aa11.06□□□□□ -0.64
VANGL1-202ENST00000355485 ZBTB47Q9UFB7 747 aaPredicted RBP11.03□□□□□ -0.64
VANGL1-202ENST00000355485 ANP32EQ9BTT0 268 aa11.02□□□□□ -0.65
VANGL1-202ENST00000355485 ANP32AP39687 249 aaKnown RBP11□□□□□ -0.65
VANGL1-202ENST00000355485 RTN4Q9NQC3 1192 aaKnown RBP11□□□□□ -0.65
VANGL1-202ENST00000355485 ANP32CO43423 234 aa10.99□□□□□ -0.65
VANGL1-202ENST00000355485 NEFMP07197 916 aa10.99□□□□□ -0.65
VANGL1-202ENST00000355485 ARXQ96QS3 562 aa10.97□□□□□ -0.65
VANGL1-202ENST00000355485 IRX6P78412 446 aaPredicted RBP10.95□□□□□ -0.66
VANGL1-202ENST00000355485 GLIPR1L2Q4G1C9 344 aa10.93□□□□□ -0.66
VANGL1-202ENST00000355485 SLC24A1O60721 1099 aa10.91□□□□□ -0.66
VANGL1-202ENST00000355485 MIER1Q8N108 512 aa10.9□□□□□ -0.66
VANGL1-202ENST00000355485 FAM50AQ14320 339 aaKnown RBP10.89□□□□□ -0.67
VANGL1-202ENST00000355485 CDK11BP21127 795 aaKnown RBP10.87□□□□□ -0.67
VANGL1-202ENST00000355485 TRIM52Q96A61 297 aa10.83□□□□□ -0.68
VANGL1-202ENST00000355485 ZNF326Q5BKZ1 582 aaKnown RBP10.79□□□□□ -0.68
VANGL1-202ENST00000355485 HNRNPUQ00839 825 aaKnown RBP eCLIP10.78□□□□□ -0.68
VANGL1-202ENST00000355485 DDX10Q13206 875 aaKnown RBP10.78□□□□□ -0.68
VANGL1-202ENST00000355485 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.77□□□□□ -0.68
VANGL1-202ENST00000355485 CSRNP3Q8WYN3 585 aa10.76□□□□□ -0.69
VANGL1-202ENST00000355485 FAM9BQ8IZU0 186 aa10.76□□□□□ -0.69
VANGL1-202ENST00000355485 SALL2Q9Y467 1007 aaPredicted RBP10.75□□□□□ -0.69
VANGL1-202ENST00000355485 ESF1Q9H501 851 aaKnown RBP10.74□□□□□ -0.69
VANGL1-202ENST00000355485 CANXP27824 592 aaKnown RBP10.74□□□□□ -0.69
VANGL1-202ENST00000355485 DEKP35659 375 aaKnown RBP10.72□□□□□ -0.69
VANGL1-202ENST00000355485 SUPT16HQ9Y5B9 1047 aaKnown RBP10.7□□□□□ -0.7
VANGL1-202ENST00000355485 HIRIP3Q9BW71 556 aaPredicted RBP10.7□□□□□ -0.7
VANGL1-202ENST00000355485 LAS1LQ9Y4W2 734 aaKnown RBP10.7□□□□□ -0.7
VANGL1-202ENST00000355485 SENP3-EIF4A1A0A087X0R7 540 aa10.7□□□□□ -0.7
VANGL1-202ENST00000355485 CCDC136Q96JN2 1154 aa10.69□□□□□ -0.7
VANGL1-202ENST00000355485 AMER1Q5JTC6 1135 aaPredicted RBP10.67□□□□□ -0.7
VANGL1-202ENST00000355485 ANP32BQ92688 251 aaKnown RBP10.67□□□□□ -0.7
VANGL1-202ENST00000355485 NAP1L5Q96NT1 182 aaPredicted RBP10.67□□□□□ -0.7
VANGL1-202ENST00000355485 DCAF1Q9Y4B6 1507 aa10.63□□□□□ -0.71
VANGL1-202ENST00000355485 MYO15BQ96JP2 1530 aa10.62□□□□□ -0.71
VANGL1-202ENST00000355485 ARID4BQ4LE39 1312 aaPredicted RBP10.61□□□□□ -0.71
VANGL1-202ENST00000355485 ABCC9O60706 1549 aa10.6□□□□□ -0.71
VANGL1-202ENST00000355485 HSP90AA1P07900 732 aaKnown RBP10.6□□□□□ -0.71
VANGL1-202ENST00000355485 NOP58Q9Y2X3 529 aaKnown RBP10.59□□□□□ -0.71
VANGL1-202ENST00000355485 RBM19Q9Y4C8 960 aaKnown RBP10.58□□□□□ -0.72
VANGL1-202ENST00000355485 TSHZ2Q9NRE2 1034 aa10.56□□□□□ -0.72
VANGL1-202ENST00000355485 TRIM44Q96DX7 344 aaPredicted RBP10.52□□□□□ -0.72
VANGL1-202ENST00000355485 UPF2Q9HAU5 1272 aaKnown RBP10.51□□□□□ -0.73
VANGL1-202ENST00000355485 P3H3Q8IVL6 736 aa10.51□□□□□ -0.73
VANGL1-202ENST00000355485 A0A0G2JS52 829 aa10.51□□□□□ -0.73
VANGL1-202ENST00000355485 KRI1Q8N9T8 703 aaKnown RBP10.5□□□□□ -0.73
VANGL1-202ENST00000355485 ARID3AQ99856 593 aa10.5□□□□□ -0.73
VANGL1-202ENST00000355485 TPRNQ4KMQ1 711 aa10.5□□□□□ -0.73
VANGL1-202ENST00000355485 MRS2Q9HD23 443 aa10.49□□□□□ -0.73
VANGL1-202ENST00000355485 DDRGK1Q96HY6 314 aa10.49□□□□□ -0.73
VANGL1-202ENST00000355485 B4GALNT3Q6L9W6 998 aa10.49□□□□□ -0.73
VANGL1-202ENST00000355485 STAG3Q9UJ98 1225 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms