RNA–Protein interactions for RNA: ENST00000544663.1

AP003174.2-201, humanhuman

TSL 3 BASIC

Gene AP003174.2, Length 294 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003174.2-201ENST00000544663 AEBP2Q6ZN18 517 aaPredicted RBP18.54■□□□□ 0.56
AP003174.2-201ENST00000544663 CHIC1Q5VXU3 224 aa17.82■□□□□ 0.44
AP003174.2-201ENST00000544663 SENP3Q9H4L4 574 aaPredicted RBP15.91■□□□□ 0.14
AP003174.2-201ENST00000544663 PHF23Q9BUL5 403 aaPredicted RBP15.7■□□□□ 0.1
AP003174.2-201ENST00000544663 FOXD1Q16676 465 aa14.75□□□□□ -0.05
AP003174.2-201ENST00000544663 PLPPR3Q6T4P5 718 aa14.38□□□□□ -0.11
AP003174.2-201ENST00000544663 POTEDQ86YR6 584 aa13.91□□□□□ -0.18
AP003174.2-201ENST00000544663 ADRA2BP18089 450 aa13.9□□□□□ -0.18
AP003174.2-201ENST00000544663 PIAS4Q8N2W9 510 aaPredicted RBP13.89□□□□□ -0.19
AP003174.2-201ENST00000544663 PPP6R1Q9UPN7 881 aa13.89□□□□□ -0.19
AP003174.2-201ENST00000544663 MSH5O43196 834 aa13.82□□□□□ -0.2
AP003174.2-201ENST00000544663 SCAF1Q9H7N4 1312 aaKnown RBP12.84□□□□□ -0.35
AP003174.2-201ENST00000544663 MAPK8IP2Q13387 824 aaPredicted RBP12.7□□□□□ -0.38
AP003174.2-201ENST00000544663 PPP4R3CPQ6ZMV5 832 aa12.6□□□□□ -0.39
AP003174.2-201ENST00000544663 DMRT2Q9Y5R5 561 aa12.6□□□□□ -0.39
AP003174.2-201ENST00000544663 CNKSR2Q8WXI2 1034 aa12.34□□□□□ -0.43
AP003174.2-201ENST00000544663 NCBP3Q53F19 620 aaKnown RBP12.24□□□□□ -0.45
AP003174.2-201ENST00000544663 DCAF8L1A6NGE4 600 aa12.22□□□□□ -0.45
AP003174.2-201ENST00000544663 HOXD11P31277 338 aaPredicted RBP12.17□□□□□ -0.46
AP003174.2-201ENST00000544663 RNF216Q9NWF9 866 aaPredicted RBP12.16□□□□□ -0.46
AP003174.2-201ENST00000544663 NPM3O75607 178 aaKnown RBP11.96□□□□□ -0.49
AP003174.2-201ENST00000544663 KCNA4P22459 653 aa11.87□□□□□ -0.51
AP003174.2-201ENST00000544663 CACNB1Q02641 598 aaPredicted RBP11.8□□□□□ -0.52
AP003174.2-201ENST00000544663 RNF39Q9H2S5 420 aa11.74□□□□□ -0.53
AP003174.2-201ENST00000544663 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.72□□□□□ -0.53
AP003174.2-201ENST00000544663 DNAJC5BQ9UF47 199 aa11.72□□□□□ -0.53
AP003174.2-201ENST00000544663 C1QBPQ07021 282 aaKnown RBP11.64□□□□□ -0.55
AP003174.2-201ENST00000544663 U3KPZ7 1027 aaPredicted RBP11.38□□□□□ -0.59
AP003174.2-201ENST00000544663 SLC4A2P04920 1241 aa11.34□□□□□ -0.59
AP003174.2-201ENST00000544663 SLC4A1APQ9BWU0 796 aaKnown RBP11.3□□□□□ -0.6
AP003174.2-201ENST00000544663 CAPN15O75808 1086 aa11.25□□□□□ -0.61
AP003174.2-201ENST00000544663 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.24□□□□□ -0.61
AP003174.2-201ENST00000544663 APLP2Q06481 763 aa11.24□□□□□ -0.61
AP003174.2-201ENST00000544663 HNRNPUL2Q1KMD3 747 aaKnown RBP11.24□□□□□ -0.61
AP003174.2-201ENST00000544663 SPINK5Q9NQ38 1064 aaPredicted RBP11.19□□□□□ -0.62
AP003174.2-201ENST00000544663 SAMD1Q6SPF0 538 aaPredicted RBP11.16□□□□□ -0.62
AP003174.2-201ENST00000544663 TRHP20396 242 aaPredicted RBP11.11□□□□□ -0.63
AP003174.2-201ENST00000544663 MYCNP04198 464 aaPredicted RBP11.1□□□□□ -0.63
AP003174.2-201ENST00000544663 ZNF219Q9P2Y4 722 aaPredicted RBP11.07□□□□□ -0.64
AP003174.2-201ENST00000544663 DSG3P32926 999 aa11.06□□□□□ -0.64
AP003174.2-201ENST00000544663 FOXD4L1Q9NU39 408 aa11.06□□□□□ -0.64
AP003174.2-201ENST00000544663 ABCB7O75027 752 aa10.97□□□□□ -0.65
AP003174.2-201ENST00000544663 ZBTB22O15209 634 aa10.85□□□□□ -0.67
AP003174.2-201ENST00000544663 POLA2Q14181 598 aa10.82□□□□□ -0.68
AP003174.2-201ENST00000544663 POTEHQ6S545 545 aa10.76□□□□□ -0.69
AP003174.2-201ENST00000544663 ATF5Q9Y2D1 282 aaPredicted RBP10.75□□□□□ -0.69
AP003174.2-201ENST00000544663 ATXN8OSP0DMR3 200 aa10.71□□□□□ -0.69
AP003174.2-201ENST00000544663 ZBTB12Q9Y330 459 aaPredicted RBP10.65□□□□□ -0.7
AP003174.2-201ENST00000544663 RBM42Q9BTD8 480 aaKnown RBP10.64□□□□□ -0.71
AP003174.2-201ENST00000544663 EHMT2Q96KQ7 1210 aa10.58□□□□□ -0.72
AP003174.2-201ENST00000544663 CSRNP3Q8WYN3 585 aa10.54□□□□□ -0.72
AP003174.2-201ENST00000544663 FBLN2P98095 1184 aa10.48□□□□□ -0.73
AP003174.2-201ENST00000544663 OSCARQ8IYS5 282 aa10.44□□□□□ -0.74
AP003174.2-201ENST00000544663 AKT1S1Q96B36 256 aa10.38□□□□□ -0.75
AP003174.2-201ENST00000544663 CHRDL2Q6WN34 429 aa10.3□□□□□ -0.76
AP003174.2-201ENST00000544663 SPDYE2BA6NHP3 402 aa10.29□□□□□ -0.76
AP003174.2-201ENST00000544663 SPDYE6P0CI01 402 aa10.29□□□□□ -0.76
AP003174.2-201ENST00000544663 SPDYE2Q495Y8 402 aa10.29□□□□□ -0.76
AP003174.2-201ENST00000544663 REM2Q8IYK8 340 aaPredicted RBP10.27□□□□□ -0.77
AP003174.2-201ENST00000544663 MKRN4PQ13434 485 aaPredicted RBP10.26□□□□□ -0.77
AP003174.2-201ENST00000544663 ZNF692Q9BU19 519 aaPredicted RBP10.23□□□□□ -0.77
AP003174.2-201ENST00000544663 PITPNM1O00562 1244 aa10.14□□□□□ -0.79
AP003174.2-201ENST00000544663 SPDYE1Q8NFV5 336 aaPredicted RBP10.11□□□□□ -0.79
AP003174.2-201ENST00000544663 CLEC11AQ9Y240 323 aa10.11□□□□□ -0.79
AP003174.2-201ENST00000544663 SSUH2Q9Y2M2 353 aa10.1□□□□□ -0.79
AP003174.2-201ENST00000544663 PABPN1Q86U42 306 aaKnown RBP eCLIP10.06□□□□□ -0.8
AP003174.2-201ENST00000544663 PIP4P2Q8N4L2 257 aa10.05□□□□□ -0.8
AP003174.2-201ENST00000544663 FXR2P51116 673 aaKnown RBP eCLIP10□□□□□ -0.81
AP003174.2-201ENST00000544663 SPDYE4A6NLX3 237 aa9.96□□□□□ -0.82
AP003174.2-201ENST00000544663 PRR29P0C7W0 189 aa9.95□□□□□ -0.82
AP003174.2-201ENST00000544663 HAX1O00165 279 aa9.93□□□□□ -0.82
AP003174.2-201ENST00000544663 PRKAR2AP13861 404 aaKnown RBP9.93□□□□□ -0.82
AP003174.2-201ENST00000544663 STAG3Q9UJ98 1225 aa9.86□□□□□ -0.83
AP003174.2-201ENST00000544663 CHADLQ6NUI6 762 aa9.82□□□□□ -0.84
AP003174.2-201ENST00000544663 SP7Q8TDD2 431 aaPredicted RBP9.8□□□□□ -0.84
AP003174.2-201ENST00000544663 FARP1Q9Y4F1 1045 aaPredicted RBP9.7□□□□□ -0.86
AP003174.2-201ENST00000544663 EVX2Q03828 476 aa9.68□□□□□ -0.86
AP003174.2-201ENST00000544663 C19orf67A6NJJ6 358 aa9.67□□□□□ -0.86
AP003174.2-201ENST00000544663 CREBZFQ9NS37 354 aa9.64□□□□□ -0.87
AP003174.2-201ENST00000544663 FKBP8Q14318 412 aa9.63□□□□□ -0.87
AP003174.2-201ENST00000544663 CD44P16070 742 aaKnown RBP9.62□□□□□ -0.87
AP003174.2-201ENST00000544663 PROM2Q8N271 834 aa9.62□□□□□ -0.87
AP003174.2-201ENST00000544663 PLEKHG5O94827 1062 aa9.6□□□□□ -0.87
AP003174.2-201ENST00000544663 NPM1P06748 294 aaKnown RBP eCLIP9.59□□□□□ -0.87
AP003174.2-201ENST00000544663 PAK3O75914 559 aaPredicted RBP9.56□□□□□ -0.88
AP003174.2-201ENST00000544663 MIER1Q8N108 512 aa9.55□□□□□ -0.88
AP003174.2-201ENST00000544663 ZRANB1Q9UGI0 708 aa9.53□□□□□ -0.88
AP003174.2-201ENST00000544663 GABBR2O75899 941 aa9.52□□□□□ -0.89
AP003174.2-201ENST00000544663 PLCD3Q8N3E9 789 aa9.5□□□□□ -0.89
AP003174.2-201ENST00000544663 CLCN6P51797 869 aa9.49□□□□□ -0.89
AP003174.2-201ENST00000544663 MNX1P50219 401 aaPredicted RBP9.45□□□□□ -0.9
AP003174.2-201ENST00000544663 ZNF579Q8NAF0 562 aaKnown RBP9.44□□□□□ -0.9
AP003174.2-201ENST00000544663 FBXO3Q9UK99 471 aa9.44□□□□□ -0.9
AP003174.2-201ENST00000544663 ZBTB47Q9UFB7 747 aaPredicted RBP9.42□□□□□ -0.9
AP003174.2-201ENST00000544663 DCBLD2Q96PD2 775 aa9.4□□□□□ -0.9
AP003174.2-201ENST00000544663 TSPYL2Q9H2G4 693 aaPredicted RBP9.4□□□□□ -0.9
AP003174.2-201ENST00000544663 PHF12Q96QT6 1004 aa9.36□□□□□ -0.91
AP003174.2-201ENST00000544663 GALR2O43603 387 aaPredicted RBP9.31□□□□□ -0.92
AP003174.2-201ENST00000544663 KLHL34Q8N239 644 aa9.28□□□□□ -0.92
AP003174.2-201ENST00000544663 RASEFQ8IZ41 740 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms