Protein–RNA interactions for Protein: Q9Y5G5

PCDHGA8, Protocadherin gamma-A8, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8Q9Y5G5 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
PCDHGA8Q9Y5G5 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.06■□□□□ 0.64
PCDHGA8Q9Y5G5 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDHGA8Q9Y5G5 AC113347.1-201ENST00000413321 391 ntBASIC19.06■□□□□ 0.64
PCDHGA8Q9Y5G5 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.06■□□□□ 0.64
PCDHGA8Q9Y5G5 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDHGA8Q9Y5G5 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDHGA8Q9Y5G5 AP000525.1-201ENST00000608286 694 ntBASIC19.06■□□□□ 0.64
PCDHGA8Q9Y5G5 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDHGA8Q9Y5G5 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA8Q9Y5G5 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
PCDHGA8Q9Y5G5 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA8Q9Y5G5 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
PCDHGA8Q9Y5G5 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA8Q9Y5G5 AC098818.2-201ENST00000564925 2320 ntBASIC19.06■□□□□ 0.64
PCDHGA8Q9Y5G5 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA8Q9Y5G5 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
PCDHGA8Q9Y5G5 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHGA8Q9Y5G5 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA8Q9Y5G5 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA8Q9Y5G5 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA8Q9Y5G5 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA8Q9Y5G5 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA8Q9Y5G5 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA8Q9Y5G5 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA8Q9Y5G5 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA8Q9Y5G5 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHGA8Q9Y5G5 AC005521.1-201ENST00000393351 872 ntBASIC19.05■□□□□ 0.64
PCDHGA8Q9Y5G5 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHGA8Q9Y5G5 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.05■□□□□ 0.64
PCDHGA8Q9Y5G5 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHGA8Q9Y5G5 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.05■□□□□ 0.64
PCDHGA8Q9Y5G5 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA8Q9Y5G5 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHGA8Q9Y5G5 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.05■□□□□ 0.64
PCDHGA8Q9Y5G5 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.05■□□□□ 0.64
PCDHGA8Q9Y5G5 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA8Q9Y5G5 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA8Q9Y5G5 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA8Q9Y5G5 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA8Q9Y5G5 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA8Q9Y5G5 LINC01568-207ENST00000641790 1380 ntBASIC19.05■□□□□ 0.64
PCDHGA8Q9Y5G5 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA8Q9Y5G5 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
PCDHGA8Q9Y5G5 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHGA8Q9Y5G5 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHGA8Q9Y5G5 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA8Q9Y5G5 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA8Q9Y5G5 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
PCDHGA8Q9Y5G5 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA8Q9Y5G5 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHGA8Q9Y5G5 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA8Q9Y5G5 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA8Q9Y5G5 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
PCDHGA8Q9Y5G5 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA8Q9Y5G5 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA8Q9Y5G5 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA8Q9Y5G5 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.04■□□□□ 0.64
PCDHGA8Q9Y5G5 MIR1238-201ENST00000408483 83 ntBASIC19.04■□□□□ 0.64
PCDHGA8Q9Y5G5 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.04■□□□□ 0.64
PCDHGA8Q9Y5G5 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHGA8Q9Y5G5 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA8Q9Y5G5 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA8Q9Y5G5 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHGA8Q9Y5G5 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA8Q9Y5G5 AC116562.4-201ENST00000641316 2276 ntBASIC19.04■□□□□ 0.64
PCDHGA8Q9Y5G5 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA8Q9Y5G5 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA8Q9Y5G5 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHGA8Q9Y5G5 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
PCDHGA8Q9Y5G5 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
PCDHGA8Q9Y5G5 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA8Q9Y5G5 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA8Q9Y5G5 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA8Q9Y5G5 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA8Q9Y5G5 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA8Q9Y5G5 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA8Q9Y5G5 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA8Q9Y5G5 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA8Q9Y5G5 KRT8P9-201ENST00000558927 1449 ntBASIC19.03■□□□□ 0.64
PCDHGA8Q9Y5G5 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.03■□□□□ 0.64
PCDHGA8Q9Y5G5 KSR1P1-201ENST00000446298 240 ntBASIC19.03■□□□□ 0.64
PCDHGA8Q9Y5G5 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHGA8Q9Y5G5 AC116562.2-201ENST00000507042 360 ntBASIC19.03■□□□□ 0.64
PCDHGA8Q9Y5G5 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.03■□□□□ 0.64
PCDHGA8Q9Y5G5 NAPSB-206ENST00000562112 1266 ntBASIC19.03■□□□□ 0.64
PCDHGA8Q9Y5G5 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHGA8Q9Y5G5 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.03■□□□□ 0.64
PCDHGA8Q9Y5G5 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PCDHGA8Q9Y5G5 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA8Q9Y5G5 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
PCDHGA8Q9Y5G5 BX323043.1-201ENST00000641006 1765 ntBASIC19.03■□□□□ 0.64
PCDHGA8Q9Y5G5 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA8Q9Y5G5 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA8Q9Y5G5 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA8Q9Y5G5 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHGA8Q9Y5G5 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA8Q9Y5G5 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHGA8Q9Y5G5 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHGA8Q9Y5G5 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms