Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA9Q9Y5G4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA9Q9Y5G4 PCDHAC2-203ENST00000615316 3011 ntBASIC18.16■□□□□ 0.5
PCDHGA9Q9Y5G4 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.16■□□□□ 0.5
PCDHGA9Q9Y5G4 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHGA9Q9Y5G4 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHGA9Q9Y5G4 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA9Q9Y5G4 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA9Q9Y5G4 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA9Q9Y5G4 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA9Q9Y5G4 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA9Q9Y5G4 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA9Q9Y5G4 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PCDHGA9Q9Y5G4 ATP5G1P1-201ENST00000448724 379 ntBASIC18.16■□□□□ 0.5
PCDHGA9Q9Y5G4 AC104076.2-201ENST00000448912 469 ntBASIC18.16■□□□□ 0.5
PCDHGA9Q9Y5G4 B3GAT3P1-201ENST00000471720 806 ntBASIC18.16■□□□□ 0.5
PCDHGA9Q9Y5G4 AC128688.1-201ENST00000487626 519 ntBASIC18.16■□□□□ 0.5
PCDHGA9Q9Y5G4 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PCDHGA9Q9Y5G4 NTF6B-201ENST00000591913 560 ntBASIC18.16■□□□□ 0.5
PCDHGA9Q9Y5G4 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PCDHGA9Q9Y5G4 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA9Q9Y5G4 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PCDHGA9Q9Y5G4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHGA9Q9Y5G4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDHGA9Q9Y5G4 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHGA9Q9Y5G4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA9Q9Y5G4 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA9Q9Y5G4 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA9Q9Y5G4 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDHGA9Q9Y5G4 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA9Q9Y5G4 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDHGA9Q9Y5G4 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA9Q9Y5G4 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
PCDHGA9Q9Y5G4 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA9Q9Y5G4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHGA9Q9Y5G4 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA9Q9Y5G4 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHGA9Q9Y5G4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA9Q9Y5G4 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHGA9Q9Y5G4 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA9Q9Y5G4 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA9Q9Y5G4 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA9Q9Y5G4 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHGA9Q9Y5G4 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA9Q9Y5G4 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHGA9Q9Y5G4 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA9Q9Y5G4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.15■□□□□ 0.5
PCDHGA9Q9Y5G4 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.15■□□□□ 0.5
PCDHGA9Q9Y5G4 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHGA9Q9Y5G4 AC116351.2-201ENST00000606540 1585 ntBASIC18.15■□□□□ 0.5
PCDHGA9Q9Y5G4 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
PCDHGA9Q9Y5G4 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PCDHGA9Q9Y5G4 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHGA9Q9Y5G4 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA9Q9Y5G4 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PCDHGA9Q9Y5G4 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
PCDHGA9Q9Y5G4 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA9Q9Y5G4 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDHGA9Q9Y5G4 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA9Q9Y5G4 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA9Q9Y5G4 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDHGA9Q9Y5G4 KRT18P16-201ENST00000510337 1294 ntBASIC18.14■□□□□ 0.49
PCDHGA9Q9Y5G4 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDHGA9Q9Y5G4 AC010203.1-204ENST00000548782 407 ntBASIC18.14■□□□□ 0.49
PCDHGA9Q9Y5G4 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
PCDHGA9Q9Y5G4 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA9Q9Y5G4 AC131212.4-201ENST00000623606 975 ntBASIC18.14■□□□□ 0.49
PCDHGA9Q9Y5G4 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.14■□□□□ 0.49
PCDHGA9Q9Y5G4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA9Q9Y5G4 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA9Q9Y5G4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA9Q9Y5G4 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
PCDHGA9Q9Y5G4 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PCDHGA9Q9Y5G4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA9Q9Y5G4 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHGA9Q9Y5G4 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHGA9Q9Y5G4 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA9Q9Y5G4 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA9Q9Y5G4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHGA9Q9Y5G4 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHGA9Q9Y5G4 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PCDHGA9Q9Y5G4 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA9Q9Y5G4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA9Q9Y5G4 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA9Q9Y5G4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA9Q9Y5G4 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHGA9Q9Y5G4 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA9Q9Y5G4 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA9Q9Y5G4 AC004980.1-204ENST00000429707 299 ntBASIC18.13■□□□□ 0.49
PCDHGA9Q9Y5G4 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.13■□□□□ 0.49
PCDHGA9Q9Y5G4 AC087388.1-201ENST00000571370 1112 ntBASIC18.13■□□□□ 0.49
PCDHGA9Q9Y5G4 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.13■□□□□ 0.49
PCDHGA9Q9Y5G4 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHGA9Q9Y5G4 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA9Q9Y5G4 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA9Q9Y5G4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA9Q9Y5G4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHGA9Q9Y5G4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA9Q9Y5G4 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHGA9Q9Y5G4 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms