Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MRPS28Q9Y2Q9 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MRPS28Q9Y2Q9 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
MRPS28Q9Y2Q9 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.71■□□□□ 0.27
MRPS28Q9Y2Q9 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.71■□□□□ 0.27
MRPS28Q9Y2Q9 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MRPS28Q9Y2Q9 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
MRPS28Q9Y2Q9 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
MRPS28Q9Y2Q9 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
MRPS28Q9Y2Q9 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
MRPS28Q9Y2Q9 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
MRPS28Q9Y2Q9 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MRPS28Q9Y2Q9 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
MRPS28Q9Y2Q9 ME3-201ENST00000323418 1068 ntTSL 5 BASIC16.71■□□□□ 0.27
MRPS28Q9Y2Q9 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
MRPS28Q9Y2Q9 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
MRPS28Q9Y2Q9 AL512625.2-201ENST00000417533 625 ntBASIC16.71■□□□□ 0.27
MRPS28Q9Y2Q9 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MRPS28Q9Y2Q9 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MRPS28Q9Y2Q9 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.71■□□□□ 0.27
MRPS28Q9Y2Q9 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MRPS28Q9Y2Q9 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC16.71■□□□□ 0.27
MRPS28Q9Y2Q9 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.71■□□□□ 0.27
MRPS28Q9Y2Q9 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.71■□□□□ 0.27
MRPS28Q9Y2Q9 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC16.71■□□□□ 0.27
MRPS28Q9Y2Q9 MAZ-216ENST00000616501 991 ntTSL 5 BASIC16.71■□□□□ 0.27
MRPS28Q9Y2Q9 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC16.71■□□□□ 0.27
MRPS28Q9Y2Q9 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16.71■□□□□ 0.27
MRPS28Q9Y2Q9 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
MRPS28Q9Y2Q9 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
MRPS28Q9Y2Q9 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MRPS28Q9Y2Q9 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MRPS28Q9Y2Q9 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.71■□□□□ 0.27
MRPS28Q9Y2Q9 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MRPS28Q9Y2Q9 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
MRPS28Q9Y2Q9 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.71■□□□□ 0.27
MRPS28Q9Y2Q9 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MRPS28Q9Y2Q9 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MRPS28Q9Y2Q9 AL161938.1-201ENST00000569833 2180 ntBASIC16.71■□□□□ 0.27
MRPS28Q9Y2Q9 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MRPS28Q9Y2Q9 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MRPS28Q9Y2Q9 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
MRPS28Q9Y2Q9 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
MRPS28Q9Y2Q9 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
MRPS28Q9Y2Q9 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.7■□□□□ 0.26
MRPS28Q9Y2Q9 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
MRPS28Q9Y2Q9 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MRPS28Q9Y2Q9 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MRPS28Q9Y2Q9 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
MRPS28Q9Y2Q9 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.7■□□□□ 0.26
MRPS28Q9Y2Q9 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
MRPS28Q9Y2Q9 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
MRPS28Q9Y2Q9 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.7■□□□□ 0.26
MRPS28Q9Y2Q9 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MRPS28Q9Y2Q9 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MRPS28Q9Y2Q9 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.7■□□□□ 0.26
MRPS28Q9Y2Q9 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MRPS28Q9Y2Q9 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
MRPS28Q9Y2Q9 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC16.7■□□□□ 0.26
MRPS28Q9Y2Q9 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MRPS28Q9Y2Q9 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MRPS28Q9Y2Q9 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
MRPS28Q9Y2Q9 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MRPS28Q9Y2Q9 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MRPS28Q9Y2Q9 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
MRPS28Q9Y2Q9 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
MRPS28Q9Y2Q9 AL138781.2-201ENST00000617896 1843 ntBASIC16.7■□□□□ 0.26
MRPS28Q9Y2Q9 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MRPS28Q9Y2Q9 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
MRPS28Q9Y2Q9 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MRPS28Q9Y2Q9 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
MRPS28Q9Y2Q9 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
MRPS28Q9Y2Q9 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MRPS28Q9Y2Q9 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MRPS28Q9Y2Q9 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
MRPS28Q9Y2Q9 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MRPS28Q9Y2Q9 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.69■□□□□ 0.26
MRPS28Q9Y2Q9 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MRPS28Q9Y2Q9 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MRPS28Q9Y2Q9 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MRPS28Q9Y2Q9 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.69■□□□□ 0.26
MRPS28Q9Y2Q9 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MRPS28Q9Y2Q9 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
MRPS28Q9Y2Q9 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MRPS28Q9Y2Q9 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MRPS28Q9Y2Q9 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.69■□□□□ 0.26
MRPS28Q9Y2Q9 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MRPS28Q9Y2Q9 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16.69■□□□□ 0.26
MRPS28Q9Y2Q9 GPX1P1-201ENST00000388829 606 ntBASIC16.69■□□□□ 0.26
MRPS28Q9Y2Q9 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
MRPS28Q9Y2Q9 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
MRPS28Q9Y2Q9 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16.69■□□□□ 0.26
MRPS28Q9Y2Q9 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC16.69■□□□□ 0.26
MRPS28Q9Y2Q9 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.69■□□□□ 0.26
MRPS28Q9Y2Q9 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.69■□□□□ 0.26
MRPS28Q9Y2Q9 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC16.69■□□□□ 0.26
MRPS28Q9Y2Q9 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC16.69■□□□□ 0.26
MRPS28Q9Y2Q9 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
MRPS28Q9Y2Q9 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MRPS28Q9Y2Q9 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms