Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
LRCH1Q9Y2L9 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LRCH1Q9Y2L9 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRCH1Q9Y2L9 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.43■□□□□ 0.54
LRCH1Q9Y2L9 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
LRCH1Q9Y2L9 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.43■□□□□ 0.54
LRCH1Q9Y2L9 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LRCH1Q9Y2L9 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LRCH1Q9Y2L9 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
LRCH1Q9Y2L9 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.43■□□□□ 0.54
LRCH1Q9Y2L9 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRCH1Q9Y2L9 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.43■□□□□ 0.54
LRCH1Q9Y2L9 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LRCH1Q9Y2L9 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.43■□□□□ 0.54
LRCH1Q9Y2L9 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRCH1Q9Y2L9 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.43■□□□□ 0.54
LRCH1Q9Y2L9 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRCH1Q9Y2L9 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
LRCH1Q9Y2L9 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LRCH1Q9Y2L9 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRCH1Q9Y2L9 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRCH1Q9Y2L9 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRCH1Q9Y2L9 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.42■□□□□ 0.54
LRCH1Q9Y2L9 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.42■□□□□ 0.54
LRCH1Q9Y2L9 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.42■□□□□ 0.54
LRCH1Q9Y2L9 AP004607.4-201ENST00000530158 1459 ntBASIC18.42■□□□□ 0.54
LRCH1Q9Y2L9 HTR7P1-202ENST00000624664 4411 ntBASIC18.42■□□□□ 0.54
LRCH1Q9Y2L9 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRCH1Q9Y2L9 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.42■□□□□ 0.54
LRCH1Q9Y2L9 SLC47A1P1-202ENST00000449666 945 ntBASIC18.42■□□□□ 0.54
LRCH1Q9Y2L9 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.42■□□□□ 0.54
LRCH1Q9Y2L9 AC126544.1-201ENST00000580842 1059 ntBASIC18.42■□□□□ 0.54
LRCH1Q9Y2L9 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
LRCH1Q9Y2L9 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LRCH1Q9Y2L9 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.42■□□□□ 0.54
LRCH1Q9Y2L9 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LRCH1Q9Y2L9 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
LRCH1Q9Y2L9 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.42■□□□□ 0.54
LRCH1Q9Y2L9 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRCH1Q9Y2L9 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRCH1Q9Y2L9 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRCH1Q9Y2L9 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRCH1Q9Y2L9 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LRCH1Q9Y2L9 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LRCH1Q9Y2L9 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LRCH1Q9Y2L9 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.42■□□□□ 0.54
LRCH1Q9Y2L9 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRCH1Q9Y2L9 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
LRCH1Q9Y2L9 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
LRCH1Q9Y2L9 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRCH1Q9Y2L9 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRCH1Q9Y2L9 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.41■□□□□ 0.54
LRCH1Q9Y2L9 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRCH1Q9Y2L9 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRCH1Q9Y2L9 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.41■□□□□ 0.54
LRCH1Q9Y2L9 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
LRCH1Q9Y2L9 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.41■□□□□ 0.54
LRCH1Q9Y2L9 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.41■□□□□ 0.54
LRCH1Q9Y2L9 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.41■□□□□ 0.54
LRCH1Q9Y2L9 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.41■□□□□ 0.54
LRCH1Q9Y2L9 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.41■□□□□ 0.54
LRCH1Q9Y2L9 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
LRCH1Q9Y2L9 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRCH1Q9Y2L9 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.41■□□□□ 0.54
LRCH1Q9Y2L9 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRCH1Q9Y2L9 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRCH1Q9Y2L9 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRCH1Q9Y2L9 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.41■□□□□ 0.54
LRCH1Q9Y2L9 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRCH1Q9Y2L9 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRCH1Q9Y2L9 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRCH1Q9Y2L9 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.41■□□□□ 0.54
LRCH1Q9Y2L9 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.41■□□□□ 0.54
LRCH1Q9Y2L9 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRCH1Q9Y2L9 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRCH1Q9Y2L9 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
LRCH1Q9Y2L9 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRCH1Q9Y2L9 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.4■□□□□ 0.54
LRCH1Q9Y2L9 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRCH1Q9Y2L9 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRCH1Q9Y2L9 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRCH1Q9Y2L9 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRCH1Q9Y2L9 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.4■□□□□ 0.54
LRCH1Q9Y2L9 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRCH1Q9Y2L9 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
LRCH1Q9Y2L9 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.4■□□□□ 0.54
LRCH1Q9Y2L9 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.4■□□□□ 0.54
LRCH1Q9Y2L9 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
LRCH1Q9Y2L9 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
LRCH1Q9Y2L9 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
LRCH1Q9Y2L9 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
LRCH1Q9Y2L9 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.4■□□□□ 0.54
LRCH1Q9Y2L9 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRCH1Q9Y2L9 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRCH1Q9Y2L9 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.4■□□□□ 0.54
LRCH1Q9Y2L9 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
LRCH1Q9Y2L9 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRCH1Q9Y2L9 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRCH1Q9Y2L9 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.4■□□□□ 0.54
LRCH1Q9Y2L9 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms