Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
FNDC3AQ9Y2H6 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.85■□□□□ 0.77
FNDC3AQ9Y2H6 AC120498.9-201ENST00000339021 3867 ntBASIC19.85■□□□□ 0.77
FNDC3AQ9Y2H6 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.85■□□□□ 0.77
FNDC3AQ9Y2H6 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.85■□□□□ 0.77
FNDC3AQ9Y2H6 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
FNDC3AQ9Y2H6 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
FNDC3AQ9Y2H6 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
FNDC3AQ9Y2H6 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.85■□□□□ 0.77
FNDC3AQ9Y2H6 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
FNDC3AQ9Y2H6 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
FNDC3AQ9Y2H6 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
FNDC3AQ9Y2H6 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.85■□□□□ 0.77
FNDC3AQ9Y2H6 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FNDC3AQ9Y2H6 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.84■□□□□ 0.77
FNDC3AQ9Y2H6 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
FNDC3AQ9Y2H6 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.84■□□□□ 0.77
FNDC3AQ9Y2H6 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
FNDC3AQ9Y2H6 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.84■□□□□ 0.77
FNDC3AQ9Y2H6 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
FNDC3AQ9Y2H6 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
FNDC3AQ9Y2H6 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
FNDC3AQ9Y2H6 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.84■□□□□ 0.77
FNDC3AQ9Y2H6 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
FNDC3AQ9Y2H6 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FNDC3AQ9Y2H6 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.84■□□□□ 0.77
FNDC3AQ9Y2H6 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.84■□□□□ 0.77
FNDC3AQ9Y2H6 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.84■□□□□ 0.77
FNDC3AQ9Y2H6 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.84■□□□□ 0.77
FNDC3AQ9Y2H6 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.84■□□□□ 0.77
FNDC3AQ9Y2H6 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.84■□□□□ 0.77
FNDC3AQ9Y2H6 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FNDC3AQ9Y2H6 HCG11-201ENST00000411553 5696 ntBASIC19.84■□□□□ 0.77
FNDC3AQ9Y2H6 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FNDC3AQ9Y2H6 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
FNDC3AQ9Y2H6 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
FNDC3AQ9Y2H6 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
FNDC3AQ9Y2H6 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
FNDC3AQ9Y2H6 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.83■□□□□ 0.77
FNDC3AQ9Y2H6 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
FNDC3AQ9Y2H6 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.83■□□□□ 0.77
FNDC3AQ9Y2H6 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
FNDC3AQ9Y2H6 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
FNDC3AQ9Y2H6 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.83■□□□□ 0.77
FNDC3AQ9Y2H6 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
FNDC3AQ9Y2H6 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
FNDC3AQ9Y2H6 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
FNDC3AQ9Y2H6 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
FNDC3AQ9Y2H6 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.83■□□□□ 0.77
FNDC3AQ9Y2H6 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
FNDC3AQ9Y2H6 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.83■□□□□ 0.77
FNDC3AQ9Y2H6 AF186192.3-201ENST00000583427 947 ntBASIC19.83■□□□□ 0.77
FNDC3AQ9Y2H6 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
FNDC3AQ9Y2H6 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.83■□□□□ 0.76
FNDC3AQ9Y2H6 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.76
FNDC3AQ9Y2H6 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
FNDC3AQ9Y2H6 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
FNDC3AQ9Y2H6 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
FNDC3AQ9Y2H6 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
FNDC3AQ9Y2H6 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
FNDC3AQ9Y2H6 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.83■□□□□ 0.76
FNDC3AQ9Y2H6 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
FNDC3AQ9Y2H6 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
FNDC3AQ9Y2H6 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
FNDC3AQ9Y2H6 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FNDC3AQ9Y2H6 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FNDC3AQ9Y2H6 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.82■□□□□ 0.76
FNDC3AQ9Y2H6 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
FNDC3AQ9Y2H6 HTR7P1-201ENST00000538670 1336 ntBASIC19.82■□□□□ 0.76
FNDC3AQ9Y2H6 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FNDC3AQ9Y2H6 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
FNDC3AQ9Y2H6 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
FNDC3AQ9Y2H6 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
FNDC3AQ9Y2H6 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
FNDC3AQ9Y2H6 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FNDC3AQ9Y2H6 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.82■□□□□ 0.76
FNDC3AQ9Y2H6 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
FNDC3AQ9Y2H6 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.82■□□□□ 0.76
FNDC3AQ9Y2H6 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.82■□□□□ 0.76
FNDC3AQ9Y2H6 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.82■□□□□ 0.76
FNDC3AQ9Y2H6 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FNDC3AQ9Y2H6 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
FNDC3AQ9Y2H6 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FNDC3AQ9Y2H6 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
FNDC3AQ9Y2H6 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FNDC3AQ9Y2H6 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
FNDC3AQ9Y2H6 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FNDC3AQ9Y2H6 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
FNDC3AQ9Y2H6 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FNDC3AQ9Y2H6 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FNDC3AQ9Y2H6 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
FNDC3AQ9Y2H6 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.81■□□□□ 0.76
FNDC3AQ9Y2H6 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
FNDC3AQ9Y2H6 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
FNDC3AQ9Y2H6 PHGDH-210ENST00000641115 1638 ntBASIC19.81■□□□□ 0.76
FNDC3AQ9Y2H6 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
FNDC3AQ9Y2H6 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
FNDC3AQ9Y2H6 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
FNDC3AQ9Y2H6 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
FNDC3AQ9Y2H6 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms