Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PARPBPQ9NWS1 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.38■□□□□ 0.37
PARPBPQ9NWS1 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.38■□□□□ 0.37
PARPBPQ9NWS1 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PARPBPQ9NWS1 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.38■□□□□ 0.37
PARPBPQ9NWS1 AL135905.2-201ENST00000584934 1404 ntBASIC17.38■□□□□ 0.37
PARPBPQ9NWS1 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PARPBPQ9NWS1 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PARPBPQ9NWS1 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.37■□□□□ 0.37
PARPBPQ9NWS1 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PARPBPQ9NWS1 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PARPBPQ9NWS1 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PARPBPQ9NWS1 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.37■□□□□ 0.37
PARPBPQ9NWS1 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PARPBPQ9NWS1 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PARPBPQ9NWS1 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PARPBPQ9NWS1 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PARPBPQ9NWS1 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
PARPBPQ9NWS1 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PARPBPQ9NWS1 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PARPBPQ9NWS1 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PARPBPQ9NWS1 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.37■□□□□ 0.37
PARPBPQ9NWS1 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.37■□□□□ 0.37
PARPBPQ9NWS1 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.37■□□□□ 0.37
PARPBPQ9NWS1 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.37■□□□□ 0.37
PARPBPQ9NWS1 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PARPBPQ9NWS1 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.37■□□□□ 0.37
PARPBPQ9NWS1 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PARPBPQ9NWS1 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PARPBPQ9NWS1 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PARPBPQ9NWS1 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PARPBPQ9NWS1 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PARPBPQ9NWS1 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PARPBPQ9NWS1 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PARPBPQ9NWS1 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PARPBPQ9NWS1 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.37■□□□□ 0.37
PARPBPQ9NWS1 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PARPBPQ9NWS1 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PARPBPQ9NWS1 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PARPBPQ9NWS1 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PARPBPQ9NWS1 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PARPBPQ9NWS1 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PARPBPQ9NWS1 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
PARPBPQ9NWS1 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.36■□□□□ 0.37
PARPBPQ9NWS1 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PARPBPQ9NWS1 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PARPBPQ9NWS1 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PARPBPQ9NWS1 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PARPBPQ9NWS1 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.36■□□□□ 0.37
PARPBPQ9NWS1 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.36■□□□□ 0.37
PARPBPQ9NWS1 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PARPBPQ9NWS1 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.36■□□□□ 0.37
PARPBPQ9NWS1 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
PARPBPQ9NWS1 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.36■□□□□ 0.37
PARPBPQ9NWS1 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
PARPBPQ9NWS1 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.36■□□□□ 0.37
PARPBPQ9NWS1 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PARPBPQ9NWS1 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.36■□□□□ 0.37
PARPBPQ9NWS1 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PARPBPQ9NWS1 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PARPBPQ9NWS1 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
PARPBPQ9NWS1 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PARPBPQ9NWS1 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PARPBPQ9NWS1 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PARPBPQ9NWS1 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.36■□□□□ 0.37
PARPBPQ9NWS1 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PARPBPQ9NWS1 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.36■□□□□ 0.37
PARPBPQ9NWS1 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PARPBPQ9NWS1 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PARPBPQ9NWS1 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PARPBPQ9NWS1 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.35■□□□□ 0.37
PARPBPQ9NWS1 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PARPBPQ9NWS1 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PARPBPQ9NWS1 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PARPBPQ9NWS1 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PARPBPQ9NWS1 AL353807.1-201ENST00000427475 662 ntBASIC17.35■□□□□ 0.37
PARPBPQ9NWS1 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.35■□□□□ 0.37
PARPBPQ9NWS1 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PARPBPQ9NWS1 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.35■□□□□ 0.37
PARPBPQ9NWS1 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.35■□□□□ 0.37
PARPBPQ9NWS1 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PARPBPQ9NWS1 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PARPBPQ9NWS1 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.35■□□□□ 0.37
PARPBPQ9NWS1 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
PARPBPQ9NWS1 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PARPBPQ9NWS1 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.35■□□□□ 0.37
PARPBPQ9NWS1 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PARPBPQ9NWS1 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PARPBPQ9NWS1 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PARPBPQ9NWS1 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PARPBPQ9NWS1 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PARPBPQ9NWS1 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.35■□□□□ 0.37
PARPBPQ9NWS1 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
PARPBPQ9NWS1 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PARPBPQ9NWS1 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PARPBPQ9NWS1 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PARPBPQ9NWS1 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
PARPBPQ9NWS1 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.34■□□□□ 0.37
PARPBPQ9NWS1 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PARPBPQ9NWS1 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms